Add new tutorial named "From reads to (pseudo) counts : guided step by step exploration" #3118
Workflow file for this run
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| name: "[CI] GTN Tutorial Linting" | |
| concurrency: | |
| group: ci-tutsli-${{ github.head_ref }} | |
| cancel-in-progress: true | |
| on: | |
| pull_request: | |
| paths: | |
| - 'Gemfile.lock' | |
| - 'topics/**' | |
| - '**/tutorial*.md' | |
| - '**/slides.html' | |
| - '**/slides/*.html' | |
| - 'learning-pathways/*' | |
| - 'faqs/**' | |
| - 'news/**' | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 1 | |
| - uses: reviewdog/action-setup@v1 | |
| with: | |
| reviewdog_version: latest | |
| # BEGIN Dependencies | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.7' | |
| architecture: 'x64' | |
| - uses: ruby/setup-ruby@v1 | |
| with: | |
| ruby-version: "3.0" | |
| - uses: actions/cache@v2 | |
| with: | |
| path: | | |
| vendor/bundle | |
| key: ${{ runner.os }}-gems-${{ hashFiles('**/Gemfile.lock') }}- | |
| restore-keys: | | |
| ${{ runner.os }}-gems- | |
| - name: Install dependencies | |
| run: | | |
| gem install bundler rubocop | |
| bundle config path vendor/bundle | |
| bundle install --jobs 4 --retry 3 | |
| pip install pyyaml | |
| bundle pristine ffi | |
| # END Dependencies | |
| - name: Check Frontmatter | |
| run: | | |
| make check-diffs ACTIVATE_ENV=pwd | |
| make check-frontmatter ACTIVATE_ENV=pwd | |
| make check-contributors ACTIVATE_ENV=pwd | |
| python bin/mergeyaml.py --nondocker > /dev/null | |
| - name: Check Tutorial Formatting | |
| run: | | |
| find topics/ -name tutorial.md | xargs -n 1 python bin/check-broken-boxes.py | reviewdog -efm="%f:%l: %m" -filter-mode=file -reporter=github-pr-review | |
| bundle exec ruby bin/lint.rb --format rdjson | reviewdog -filter-mode=file -reporter=github-pr-review -f=rdjsonl -fail-on-error | |
| env: | |
| REVIEWDOG_GITHUB_API_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - name: rubocop | |
| uses: reviewdog/action-rubocop@v2 | |
| with: | |
| rubocop_version: gemfile | |
| reporter: github-pr-review | |
| rubocop_flags: --except Layout/LineLength,Lint/RedundantCopDisableDirective | |
| fail_on_error: true |