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Update tutorial.md #8165

Update tutorial.md

Update tutorial.md #8165

Workflow file for this run

name: "[CI] Accessibility Linting"
concurrency:
group: ci-${{ github.head_ref }}
cancel-in-progress: true
# https://docs.github.com/en/free-pro-team@latest/actions/reference/workflow-syntax-for-github-actions#example-using-a-list-of-events
on:
pull_request:
types: [opened, reopened, synchronize, ready_for_review]
paths:
- 'Gemfile.lock'
- '**/*.md'
- '**/*.html'
- '*.yml'
- '*.yaml'
- 'metadata/*'
- 'topics/*/images/*'
- '_plugins/*'
- '_plugins_dev/*'
- '**/*.bib'
jobs:
build-site:
runs-on: ubuntu-latest
if: github.event_name != 'pull_request' || !github.event.pull_request.draft
steps:
- uses: actions/checkout@v2
with:
fetch-depth: 1
# BEGIN Dependencies
- uses: actions/setup-python@v2
with:
python-version: '3.7'
architecture: 'x64'
- uses: ruby/setup-ruby@v1
with:
ruby-version: "3.0"
- uses: actions/setup-node@v2
with:
node-version: '19'
- uses: actions/cache@v2
with:
path: |
vendor/bundle
~/.npm
key: ${{ runner.os }}-gems-${{ hashFiles('**/Gemfile.lock') }}-node-${{ hashFiles('**/package-lock.json') }}
restore-keys: |
${{ runner.os }}-gems-${{ hashFiles('**/Gemfile.lock') }}-node-
${{ runner.os }}-gems-
- name: Install dependencies
run: |
sudo apt-get install -y build-essential libxi-dev libglu1-mesa-dev libglew-dev pkg-config # for node
gem install bundler
bundle config path vendor/bundle
bundle install --jobs 4 --retry 3
npm install
bundle pristine ffi
# END Dependencies
- name: Build the site
run: bundle exec jekyll build --strict_front_matter -d _site/training-material --trace
- name: Validate all links, enforce alt text
run: |
bundle exec htmlproofer \
--ignore-urls "/.*localhost.*/","/.*vimeo\.com.*/","/.*gitter\.im.*/","/.*drmaa\.org.*/","/.*slides.html#.*/,/#embedded_jbrowse/","/.*videos.*.mp4.png/","/krona_(all|multisample).html/" \
--ignore-files "/.*krona.*\.html/","/.*\/files\/.*/","/.*\/node_modules\/.*/","/\/tutorials\/.*\/docker\//","/.*content.html/" \
--swap-urls "github.com/galaxyproject/training-material/tree/main:github.com/${GITHUB_REPOSITORY}/tree/${GITHUB_HEAD_REF}" \
--disable-external=true \
--enforce-https=false \
./_site
- name: Ensure no unexpected encoded HTML in output
run: |
! fgrep -R 'lt;blockquote' _site
- name: Ensure no unexpected jekyll in output
run: |
! fgrep -R 'site.pages' _site
- name: Run aXe accessibility testing on some representative URLs
run: |
node_modules/.bin/http-server _site/ &
# We can focus AND scroll these regions. I thus disable their violation warning.
# Twitter isn't our fault. Sorry.
node_modules/.bin/axe --disable scrollable-region-focusable --exclude '#twitter-widget-0' --chromedriver-path /usr/bin/chromedriver \
http://localhost:8080/training-material/ \
http://localhost:8080/training-material/hall-of-fame/ \
http://localhost:8080/training-material/hall-of-fame/hexylena/ \
http://localhost:8080/training-material/topics/introduction/ \
http://localhost:8080/training-material/topics/statistics/ \
http://localhost:8080/training-material/topics/genome-annotation/ \
http://localhost:8080/training-material/topics/admin/ \
http://localhost:8080/training-material/topics/dev/ \
http://localhost:8080/training-material/topics/introduction/tutorials/galaxy-intro-short/tutorial.html \
http://localhost:8080/training-material/topics/introduction/tutorials/galaxy-intro-short/workflows/ \
http://localhost:8080/training-material/topics/admin/tutorials/ansible-galaxy/tutorial.html
- name: Validate notebooks (If this fails, ask @hexylena to look at your notebook)
run: |
find _site | grep ipynb | xargs bundle exec ruby bin/check-valid-notebook.rb