Updating short tutorial #2320
Annotations
2 errors and 8 warnings
lint:
topics/assembly/tutorials/vgp_workflow_training/tutorial.md#L68
[rdjsonl] reported by reviewdog 🐶
Please use the link function to link to other pages within the GTN. It helps us ensure that all links are correct
Raw Output:
{"message":"Please use the link function to link to other pages within the GTN. It helps us ensure that all links are correct","location":{"path":"./topics/assembly/tutorials/vgp_workflow_training/tutorial.md","range":{"start":{"line":68,"column":37},"end":{"line":68,"column":109}}},"severity":"ERROR","code":{"value":"GTN:003","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn003"},"suggestions":[{"text":"{% link .md %}","range":{"start":{"line":68,"column":37},"end":{"line":68,"column":109}}}]}
|
lint
Process completed with exit code 1.
|
lint
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-python@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
|
lint:
topics/assembly/tutorials/vgp_workflow_training/tutorial.md#L342
[rdjsonl] reported by reviewdog 🐶
Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.
Raw Output:
{"message":"Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.","location":{"path":"./topics/assembly/tutorials/vgp_workflow_training/tutorial.md","range":{"start":{"line":342,"column":19},"end":{"line":342,"column":298}}},"severity":"WARNING","code":{"value":"GTN:002","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn002"},"suggestions":[{"text":"","range":{"start":{"line":342,"column":19},"end":{"line":342,"column":298}}}]}
|
lint:
topics/genome-annotation/tutorials/crispr-screen/tutorial.md#L409
[rdjsonl] reported by reviewdog 🐶
This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is.
Raw Output:
{"message":"This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is.","location":{"path":"./topics/genome-annotation/tutorials/crispr-screen/tutorial.md","range":{"start":{"line":409,"column":3},"end":{"line":409,"column":20}}},"severity":"WARNING","code":{"value":"GTN:020","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn020"},"suggestions":[{"text":"### Gene Summary file","range":{"start":{"line":409,"column":3},"end":{"line":409,"column":20}}}]}
|
lint:
topics/genome-annotation/tutorials/crispr-screen/tutorial.md#L433
[rdjsonl] reported by reviewdog 🐶
This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is.
Raw Output:
{"message":"This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is.","location":{"path":"./topics/genome-annotation/tutorials/crispr-screen/tutorial.md","range":{"start":{"line":433,"column":3},"end":{"line":433,"column":21}}},"severity":"WARNING","code":{"value":"GTN:020","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn020"},"suggestions":[{"text":"### sgRNA summary file","range":{"start":{"line":433,"column":3},"end":{"line":433,"column":21}}}]}
|
lint:
topics/genome-annotation/tutorials/crispr-screen/tutorial.md#L456
[rdjsonl] reported by reviewdog 🐶
This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is.
Raw Output:
{"message":"This looks like a heading, but isn't. Please use proper semantic headings where possible. You should check the heading level of this suggestion, rather than accepting the change as-is.","location":{"path":"./topics/genome-annotation/tutorials/crispr-screen/tutorial.md","range":{"start":{"line":456,"column":3},"end":{"line":456,"column":13}}},"severity":"WARNING","code":{"value":"GTN:020","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn020"},"suggestions":[{"text":"### PDF report","range":{"start":{"line":456,"column":3},"end":{"line":456,"column":13}}}]}
|
lint:
faqs/galaxy/workflows_import_from_dockstore.md#L15
[rdjsonl] reported by reviewdog 🐶
Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.
Raw Output:
{"message":"Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.","location":{"path":"./faqs/galaxy/workflows_import_from_dockstore.md","range":{"start":{"line":15,"column":19},"end":{"line":15,"column":298}}},"severity":"WARNING","code":{"value":"GTN:002","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn002"},"suggestions":[{"text":"","range":{"start":{"line":15,"column":19},"end":{"line":15,"column":298}}}]}
|
lint:
faqs/galaxy/workflows_import_from_github.md#L15
[rdjsonl] reported by reviewdog 🐶
Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.
Raw Output:
{"message":"Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.","location":{"path":"./faqs/galaxy/workflows_import_from_github.md","range":{"start":{"line":15,"column":19},"end":{"line":15,"column":298}}},"severity":"WARNING","code":{"value":"GTN:002","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn002"},"suggestions":[{"text":"","range":{"start":{"line":15,"column":19},"end":{"line":15,"column":298}}}]}
|
lint:
faqs/galaxy/workflows_import_from_workflowhub.md#L26
[rdjsonl] reported by reviewdog 🐶
Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.
Raw Output:
{"message":"Instead of embedding IFrames to YouTube contents, consider adding this video to the [GTN Video Library](https://github.com/gallantries/video-library/issues/) where it will be more visible for others.","location":{"path":"./faqs/galaxy/workflows_import_from_workflowhub.md","range":{"start":{"line":26,"column":21},"end":{"line":26,"column":300}}},"severity":"WARNING","code":{"value":"GTN:002","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn002"},"suggestions":[{"text":"","range":{"start":{"line":26,"column":21},"end":{"line":26,"column":300}}}]}
|