updated workflow files for imaging tutorial: Analyse HeLa fluorescence siRNA screen #2318
Annotations
7 errors and 1 warning
lint:
topics/imaging/tutorials/hela-screen-analysis/workflows/analyze_screen.ga#L1
[rdjsonl] reported by reviewdog 🐶
This workflow is missing a test, which is now mandatory. Please see [the FAQ on how to add tests to your workflows](https://training.galaxyproject.org/training-material/faqs/gtn/gtn_workflow_testing.html).
Raw Output:
{"message":"This workflow is missing a test, which is now mandatory. Please see [the FAQ on how to add tests to your workflows](https://training.galaxyproject.org/training-material/faqs/gtn/gtn_workflow_testing.html).","location":{"path":"./topics/imaging/tutorials/hela-screen-analysis/workflows/analyze_screen.ga","range":{"start":{"line":1,"column":1},"end":{"line":1,"column":1}}},"severity":"ERROR","code":{"value":"GTN:027","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn027"}}
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lint:
topics/imaging/tutorials/hela-screen-analysis/workflows/analyze_screen.ga#L1
[rdjsonl] reported by reviewdog 🐶
This workflow is missing a license. Please select a valid OSI license. You can correct this in the Galaxy workflow editor.
Raw Output:
{"message":"This workflow is missing a license. Please select a valid OSI license. You can correct this in the Galaxy workflow editor.","location":{"path":"./topics/imaging/tutorials/hela-screen-analysis/workflows/analyze_screen.ga","range":{"start":{"line":1,"column":1},"end":{"line":1,"column":1}}},"severity":"ERROR","code":{"value":"GTN:026","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn026"}}
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lint:
topics/imaging/tutorials/hela-screen-analysis/workflows/analyze_screen.ga#L1
[rdjsonl] reported by reviewdog 🐶
This workflow is missing a Creator. Please edit this workflow in Galaxy to add the correct creator entities
Raw Output:
{"message":"This workflow is missing a Creator. Please edit this workflow in Galaxy to add the correct creator entities","location":{"path":"./topics/imaging/tutorials/hela-screen-analysis/workflows/analyze_screen.ga","range":{"start":{"line":1,"column":1},"end":{"line":1,"column":1}}},"severity":"ERROR","code":{"value":"GTN:024","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn024"}}
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lint:
topics/imaging/tutorials/hela-screen-analysis/workflows/feature_extraction.ga#L1
[rdjsonl] reported by reviewdog 🐶
This workflow is missing a test, which is now mandatory. Please see [the FAQ on how to add tests to your workflows](https://training.galaxyproject.org/training-material/faqs/gtn/gtn_workflow_testing.html).
Raw Output:
{"message":"This workflow is missing a test, which is now mandatory. Please see [the FAQ on how to add tests to your workflows](https://training.galaxyproject.org/training-material/faqs/gtn/gtn_workflow_testing.html).","location":{"path":"./topics/imaging/tutorials/hela-screen-analysis/workflows/feature_extraction.ga","range":{"start":{"line":1,"column":1},"end":{"line":1,"column":1}}},"severity":"ERROR","code":{"value":"GTN:027","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn027"}}
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lint:
topics/imaging/tutorials/hela-screen-analysis/workflows/feature_extraction.ga#L1
[rdjsonl] reported by reviewdog 🐶
This workflow is missing a license. Please select a valid OSI license. You can correct this in the Galaxy workflow editor.
Raw Output:
{"message":"This workflow is missing a license. Please select a valid OSI license. You can correct this in the Galaxy workflow editor.","location":{"path":"./topics/imaging/tutorials/hela-screen-analysis/workflows/feature_extraction.ga","range":{"start":{"line":1,"column":1},"end":{"line":1,"column":1}}},"severity":"ERROR","code":{"value":"GTN:026","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn026"}}
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lint:
topics/imaging/tutorials/hela-screen-analysis/workflows/feature_extraction.ga#L1
[rdjsonl] reported by reviewdog 🐶
This workflow is missing a Creator. Please edit this workflow in Galaxy to add the correct creator entities
Raw Output:
{"message":"This workflow is missing a Creator. Please edit this workflow in Galaxy to add the correct creator entities","location":{"path":"./topics/imaging/tutorials/hela-screen-analysis/workflows/feature_extraction.ga","range":{"start":{"line":1,"column":1},"end":{"line":1,"column":1}}},"severity":"ERROR","code":{"value":"GTN:024","url":"https://github.com/galaxyproject/training-material/wiki/Error-Codes#gtn024"}}
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lint
Process completed with exit code 1.
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lint
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-python@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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