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Added ncRNA biotype to NCBI RefSeq GFF parser. #854

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Jun 10, 2022
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Added ncRNA biotype to NCBI RefSeq GFF parser. #854

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1 change: 1 addition & 0 deletions src/main/scala/com/fulcrumgenomics/util/GeneAnnotations.scala
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Expand Up @@ -141,6 +141,7 @@ object GeneAnnotations {
case object LncRna extends GeneBiotype { val refSeqValue = "lncRNA"; val isCoding = false }
case object MiRna extends GeneBiotype { val refSeqValue = "miRNA"; val isCoding = false }
case object MiscRna extends GeneBiotype { val refSeqValue = "misc_RNA"; val isCoding = false }
case object NcRna extends GeneBiotype { val refSeqValue = "ncRNA"; val isCoding = false }
case object Other extends GeneBiotype { val refSeqValue = "other"; val isCoding = false }
case object ProteinCoding extends GeneBiotype { val refSeqValue = "protein_coding"; val isCoding = true }
case object RNaseMrpRna extends GeneBiotype { val refSeqValue = "RNase_MRP_RNA"; val isCoding = false }
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