Fix a test.

fulcrumgenomics · Feb 7, 2022 · fcc4697 · fcc4697
1 parent a19f184
commit fcc4697
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/test/scala/com/fulcrumgenomics/umi/GroupReadsByUmiTest.scala b/src/test/scala/com/fulcrumgenomics/umi/GroupReadsByUmiTest.scala
@@ -212,7 +212,7 @@ class GroupReadsByUmiTest extends UnitSpec with OptionValues with PrivateMethodT
     val in  = builder.toTempFile()
     val out = Files.createTempFile("umi_grouped.", ".sam")
     val hist = Files.createTempFile("umi_grouped.", ".histogram.txt")
-    new GroupReadsByUmi(input=in, output=out, familySizeHistogram=Some(hist), rawTag="RX", assignTag="MI", strategy=Strategy.Edit, edits=1).execute()
+    new GroupReadsByUmi(input=in, output=out, familySizeHistogram=Some(hist), rawTag="RX", assignTag="MI", strategy=Strategy.Edit, edits=1, minMapQ=30).execute()
 
     val groups = readBamRecs(out).groupBy(_.name.charAt(0))