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WIP : Birdman dependency #13

Merged
merged 8 commits into from
May 26, 2021
Merged

WIP : Birdman dependency #13

merged 8 commits into from
May 26, 2021

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mortonjt
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This is still work in progress, but this should be able to incorporate the birdman dependency after this pull request is merged : https://github.com/gibsramen/BIRDMAn/pull/44

Things that remain

  • Update estimate command to use Birdman
  • Update slurm command to use Birdman

params=["mu", "sigma", "disp", "batch", "reference"],
dims={
"beta": ["covariate", "feature"],
"phi": ["feature"],
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what the crap is going on here??

self.specify_model(
params=["mu", "sigma", "disp", "batch", "reference"],
dims={
"beta": ["covariate", "feature"],
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and here, this doesn't make sense ...

@mortonjt
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Basic tests are passing, so we'll merge. But note that we'll need to test slurm and add CI next.

@mortonjt mortonjt merged commit f44a193 into main May 26, 2021
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