This repository has been archived by the owner on Jun 14, 2022. It is now read-only.
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This PR improves the flexibility of the
ChemicalRecord
struct. To make it more seamlessly applicable to CAMD problems, in which the numbers of segments and bonds are non-integer,ChemicalRecord
is changed to an enum that can either store the full connectivity information or only the number of segments and bonds.Further, the
chemical_record
field is removed fromPureRecord
andChemicalRecord
obtained its ownidentifier
field. Note that model parameters and segment information can still be stored in the same JSON file as serde will simply ignore additional entries. With this change,ChemicalRecord
can be used between different crates as the single data structure required to specify molecules in group contribution methods (together with model-specific segment parameters).