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VCF-Simplify-v2.1
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@everestial everestial released this 14 May 23:05
· 53 commits to master since this release
2.1
2580237
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Learn about vigilant mode.

A new "VCF-Simplify" with capabilities to:

  • Convert a VCF file to Table output:

    • convert VCF to most simple output while decompresses INFO, FORMAT field of all the SAMPLE.
    • This tools also provides more controlled workflow to only extract desired INFO tags, FORMAT tags for only desired samples of interest.

  • Convert the TABLE to VCF file

  • Convert VCF to Haplotype file (to be used in phase-Extender and phase-Stitcher)

  • Convert Haplotype file to VCF.

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