Add CI test for xarray > 2024.3

Should allows to monitor if pydata/xarray#8909 is solved

.github/workflows/pytests-upstream-xarray.yml

@@ -0,0 +1,98 @@
+name: CI tests - Xarray > 2024.3
+# Daily tests with all un-pinned dependencies
+# Allows to be warned when argopy fail tests due to updates in dependencies
+
+on:
+  schedule:
+    - cron: "0 0 * * *" # Daily “At 00:00” UTC
+  workflow_dispatch: # allows you to trigger the workflow run manually
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+permissions:
+  id-token: write
+  contents: read
+
+jobs:
+
+  all-free-but-xr:
+    # CI tests for environments with all possible requirements in free versions
+
+    name: All - Free - Py${{matrix.python-version}} - ${{ matrix.os }}
+    runs-on: ${{ matrix.os }}
+    needs: [detect-ci-trigger, detect-ci-skip]
+    if: |
+        always()
+        && (
+            (github.event_name == 'schedule' || github.event_name == 'workflow_dispatch')
+        )
+    defaults:
+      run:
+        shell: bash -l {0}
+#    timeout-minutes: 45
+    strategy:
+      fail-fast: true
+      matrix:
+        python-version: ["3.12"]
+        os: ["ubuntu-latest", "macos-latest", "windows-latest"]
+
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0 # Fetch all history for all branches and tags.
+
+      - name: Configure AWS Credentials
+        uses: aws-actions/[email protected]
+        with:
+          aws-region: us-west-1
+          role-to-assume: arn:aws:iam::${{ secrets.AWS_ACCOUNT_ID }}:role/ga-ci-tests-argopy-01
+
+      - name: Set environment variables
+        run: |
+          echo "CONDA_ENV_FILE=ci/requirements/py${{matrix.python-version}}-all-free-xarray-check.yml" >> $GITHUB_ENV
+          echo "PYTHON_VERSION=${{ matrix.python-version }}" >> $GITHUB_ENV
+
+      - name: Setup Micromamba ${{ matrix.python-version }}
+        uses: mamba-org/setup-micromamba@v1
+        with:
+          micromamba-version: '1.5.10-0'
+          environment-name: argopy-tests
+          environment-file: ${{ env.CONDA_ENV_FILE }}
+          init-shell: bash
+          cache-environment-key: "${{runner.os}}-${{runner.arch}}-py${{matrix.python-version}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}"
+          create-args: >-
+            python=${{matrix.python-version}}
+            pytest-reportlog
+
+      - name: Install argopy
+        run: |
+          python -m pip install --no-deps -e .
+
+      - name: Version info
+        run: |
+          micromamba info
+          micromamba list
+
+      - name: Test with pytest
+        run: |
+          pytest -ra -v -s -c argopy/tests/pytest.ini --durations=10 \
+            --report-log output-${{ matrix.python-version }}-log.jsonl \
+            test_fetchers_data_erddap.py
+
+      - name: Generate and publish a report on failure
+        if: |
+          failure()
+          && steps.status.outcome == 'failure'
+          && github.repository_owner == 'euroargodev'
+        uses: xarray-contrib/issue-from-pytest-log@main
+        with:
+          log-path: output-${{ matrix.python-version }}-log.jsonl
+
+      - name: Save tests log as artifact
+        uses: actions/upload-artifact@v4
+        with:
+          name: Argopy-Tests-All-${{matrix.python-version}}-${{matrix.os}}
+          path: output-${{ matrix.python-version }}-log.jsonl
+          retention-days: 90

.github/workflows/pytests-upstream.yml

@@ -202,7 +202,7 @@ jobs:
     strategy:
       fail-fast: true
       matrix:
-        python-version: ["3.9", "3.10", "3.11", "3.12"]
+        python-version: ["3.10", "3.11", "3.12"]
         os: ["ubuntu-latest", "macos-latest", "windows-latest"]
 
     steps:

ci/envs_manager

@@ -21,6 +21,7 @@ source ~/miniconda3/etc/profile.d/conda.sh
 declare -A ENV_LIST=(
 ['argopy-base']="requirements/py3.11-all-free.yml"
 ['argopy-coiled']="requirements/py3.11-coiled-free.yml"
+['argopy-xr-check']="requirements/py3.12-all-free-xarray-check.yml"
 
 ['argopy-docs-dev']="requirements/py3.9-docs-dev.yml"
 ['argopy-docs-rtd']="requirements/py3.9-docs-rtd.yml"

ci/requirements/py3.12-all-free-xarray-check.yml

@@ -0,0 +1,61 @@
+name: argopy-tests
+channels:
+  - conda-forge
+dependencies:
+  - python = 3.12
+
+# CORE:
+  - aiohttp
+  - decorator
+  - erddapy
+  - fsspec
+  - netCDF4
+  - packaging
+  - requests
+  - scipy
+  - toolz
+  - xarray > 2024.3 # to test if https://github.com/pydata/xarray/issues/8909 is solved
+
+# EXT.UTIL:
+  - boto3
+  - gsw
+  - s3fs > 2023.12.12
+  - tqdm
+  - zarr
+
+# EXT.PERF:
+  - dask
+  - distributed
+  - h5netcdf
+  - pyarrow
+
+# EXT.PLOT:
+  - IPython
+  - cartopy
+  - ipykernel
+  - ipywidgets
+  - matplotlib
+  - pyproj
+  - seaborn
+
+# DEV:
+  - aiofiles
+  - black
+  - bottleneck
+  - cfgrib
+  - cftime
+  - codespell
+  - flake8
+  - numpy
+  - pandas
+  - pip
+  - pytest
+  - pytest-cov
+  - pytest-env
+  - pytest-localftpserver
+  - setuptools
+#  - sphinx
+
+# PIP:
+  - pip:
+      - pytest-reportlog