Polish notebooks and data

[SarahAlidoost]

closes #40

Notebooks need raw data. The AtlasData dir available in EUCP sharepoint, has two folders: raw and preprocess.
The previous data is archived in AtlasData_v0.zip and available in EUCP sharepoint, too.

The maps re-generated with these refactored codes in this branch are the same as the main branch, except for ASK to fix issue #40 and for UKCP because we got revised data.

[sverhoeven]

Was able to create env with environment.yml, and documented it in https://github.com/eucp-project/atlas/blob/basic_docs/python/README.md#requirements as part of PR #43

[Peter9192]

Following @sverhoeven suggestion in #50, I enabled nbreview to aid in reviewing this PR: https://app.reviewnb.com/eucp-project/atlas/pull/38/

[review-notebook-app]

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[Peter9192]

Really nice work you've done here Sarah! Somehow some of the outputs don't render in reviewNB, but they are present locally. So the IPSL/Cordex notebook is now integrated into the IPSL/REA notebook, right?

I took the liberty of pushing a commit that formats all the notebooks using black, hope that's okay.

[sonarqubecloud]

Kudos, SonarCloud Quality Gate passed!   

0 Bugs
0 Vulnerabilities
0 Security Hotspots
0 Code Smells

No Coverage information
0.0% Duplication

[bvreede]

Data is on zenodo and has a DOI: 10.5281/zenodo.5645154

Markdown badge:

[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.5645154.svg)](https://doi.org/10.5281/zenodo.5645154)

[geek-yang]

@SarahAlidoost Thanks for your awesome work! It even took me a while to review all the changes. That's a massive amount of work.

It is nice to see that now even the cordex files are preprocessed and grouped as independent files. This looks cleaner to the user and makes the whole workflow generic. Thanks again for the polishing. I think it is ready for merging.

[SarahAlidoost]

Really nice work you've done here Sarah! Somehow some of the outputs don't render in reviewNB, but they are present locally. So the IPSL/Cordex notebook is now integrated into the IPSL/REA notebook, right?

Right, the notebook maps_creator_IPSL_cordex is now removed. Some codes are moved to the notebook cleanup_IPSL_REA. Now the maps of cordex can be created by the python script maps_creator_atlas_data.py.

I took the liberty of pushing a commit that formats all the notebooks using black, hope that's okay.

[SarahAlidoost]

@SarahAlidoost Thanks for your awesome work! It even took me a while to review all the changes. That's a massive amount of work.

It is nice to see that now even the cordex files are preprocessed and grouped as independent files. This looks cleaner to the user and makes the whole workflow generic. Thanks again for the polishing. I think it is ready for merging.

Thanks for reviewing.