v0.5.4

Fixed

• Sankey uses the right total value to calculate percentages when there are more than one sample.
• fastcat.read_length_plot() now actually uses the parameters min_len, max_len, xlim, and bin_width.

v0.5.3

Fixed

• Pin pendatic to <2.0.0 for conda.

v0.5.2

Fixed

• SeqSummary crashing when passing a dataframe as input.

v0.5.1

Fixed

• Data loaders not handling files with header-only appropriately.
• add_missing_intervals crashes with unsorted dataframes and is now generic.

v0.5.0

Added

• Data load utilities for modkit, DSS, mosdepth and bamstats.
• Test data for the new loaders.
• Add karyomap plot (binned karyotype heatmap).

v0.4.0

Added

• Add sunburst plots.
• Sankey plot for metagenomic / taxonomic data.

Fixed

• SeqSummary read quality histograms only showing one bar which is too thin to see when all reads have the same quality score.

v0.3.7

Added

• isolate_context context manager that prevents dominate from adding items to the enclosing context.
• OND style

Changed

• Nextclade widget updated to 1.0.4
• To more sensible behaviour governing when to use scientific notation for axis tick labels.

v0.3.6

Changed

• Now draws a maximum of 1,000 instead of 10,000 points in the fastcat.SeqSummary yield plot.
• Display and centre all axis tick labels in heatmaps

v0.3.5

Fixed

• A regression that prevented using lists of lists as dataset sources.

Changed

• Now uses a dropdown menu instead of regular tabs for fastcat.SeqSummary if there are multiple samples.

Added

• Add stack option to barplot.
• Add export button to datatables.
• Add function to plot cartesian heatmaps.

v0.3.4

Added

• Marker size and type in relational plots.