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Add 3D rendering of registration #264

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Jun 5, 2024
Merged

Add 3D rendering of registration #264

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25 changes: 24 additions & 1 deletion notebooks/tutorials/optimizers.ipynb
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -736,7 +736,30 @@
"execution_count": null,
"id": "eb74c29e-4187-4cab-a9a7-f328bdc7da45",
"metadata": {},
"outputs": [],
"outputs": [
{
"data": {
"text/html": [
"\n",
" <iframe\n",
" width=\"749\"\n",
" height=\"500\"\n",
" src=\"registration.html\"\n",
" frameborder=\"0\"\n",
" allowfullscreen\n",
" \n",
" ></iframe>\n",
" "
],
"text/plain": [
"<IPython.lib.display.IFrame>"
]
},
"execution_count": null,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"from IPython.display import IFrame\n",
"\n",
Expand Down
37 changes: 7 additions & 30 deletions notebooks/tutorials/timing.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -65,7 +65,7 @@
"name": "stdout",
"output_type": "stream",
"text": [
"9.94 ms ± 1.57 ms per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
"10.1 ms ± 1.47 ms per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
]
}
],
Expand All @@ -88,7 +88,7 @@
"name": "stdout",
"output_type": "stream",
"text": [
"38.3 ms ± 49.3 µs per loop (mean ± std. dev. of 7 runs, 10 loops each)\n"
"38.1 ms ± 47.1 µs per loop (mean ± std. dev. of 7 runs, 10 loops each)\n"
]
}
],
Expand All @@ -111,7 +111,7 @@
"name": "stdout",
"output_type": "stream",
"text": [
"85.4 ms ± 63.4 µs per loop (mean ± std. dev. of 7 runs, 10 loops each)\n"
"84.6 ms ± 94 µs per loop (mean ± std. dev. of 7 runs, 10 loops each)\n"
]
}
],
Expand All @@ -124,29 +124,6 @@
"del drr"
]
},
{
"cell_type": "code",
"execution_count": null,
"id": "c9a1b0ef",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"151 ms ± 165 µs per loop (mean ± std. dev. of 7 runs, 10 loops each)\n"
]
}
],
"source": [
"# |cuda\n",
"height = 400\n",
"\n",
"drr = DRR(subject, sdd=1020, height=height, delx=2.0).to(device)\n",
"%timeit drr(rotations, translations, parameterization=\"euler_angles\", convention=\"ZXY\")\n",
"del drr"
]
},
{
"cell_type": "markdown",
"id": "8c584ea5-2dc5-4606-ad9c-c04f4fca8ac3",
Expand Down Expand Up @@ -177,7 +154,7 @@
"name": "stdout",
"output_type": "stream",
"text": [
"217 ms ± 142 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
"210 ms ± 379 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
]
}
],
Expand All @@ -201,7 +178,7 @@
"name": "stdout",
"output_type": "stream",
"text": [
"305 ms ± 823 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
"295 ms ± 293 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
]
}
],
Expand All @@ -225,7 +202,7 @@
"name": "stdout",
"output_type": "stream",
"text": [
"466 ms ± 125 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
"458 ms ± 612 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
]
}
],
Expand All @@ -249,7 +226,7 @@
"name": "stdout",
"output_type": "stream",
"text": [
"924 ms ± 947 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
"906 ms ± 232 µs per loop (mean ± std. dev. of 7 runs, 1 loop each)\n"
]
}
],
Expand Down
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