eclipse-chemclipse · eselmeister · Sep 12, 2024 · Sep 12, 2024
diff --git a/...tension.msd.ui/src/org/eclipse/chemclipse/ux/extension/msd/ui/editors/DatabaseEditor.java b/...tension.msd.ui/src/org/eclipse/chemclipse/ux/extension/msd/ui/editors/DatabaseEditor.java
@@ -293,7 +293,7 @@ private void createErrorMessagePage(Composite parent) {
 		Composite composite = new Composite(parent, SWT.NONE);
 		composite.setLayout(new FillLayout());
 		Label label = new Label(composite, SWT.NONE);
-		label.setText("The mass spectrum couldn't be loaded.");
+		label.setText("The database mass spectrum couldn't be loaded.");
 	}
 
 	private void importMassSpectra(File file, boolean batch) {

diff --git a/...g/eclipse/chemclipse/ux/extension/msd/ui/internal/support/ChromatogramExportRunnable.java b/...g/eclipse/chemclipse/ux/extension/msd/ui/internal/support/ChromatogramExportRunnable.java
@@ -1,5 +1,5 @@
 /*******************************************************************************
- * Copyright (c) 2008, 2023 Lablicate GmbH.
+ * Copyright (c) 2008, 2024 Lablicate GmbH.
  *
  * All rights reserved.
  * This program and the accompanying materials are made available under the
@@ -19,6 +19,7 @@
 import org.eclipse.chemclipse.msd.model.core.IChromatogramMSD;
 import org.eclipse.chemclipse.processing.converter.ISupplier;
 import org.eclipse.chemclipse.processing.core.IProcessingInfo;
+import org.eclipse.chemclipse.processing.ui.support.ProcessingInfoPartSupport;
 import org.eclipse.core.runtime.IProgressMonitor;
 import org.eclipse.jface.operation.IRunnableWithProgress;
 
@@ -49,6 +50,7 @@ public void run(final IProgressMonitor monitor) throws InvocationTargetException
 
 		try {
 			IProcessingInfo<File> processingInfo = ChromatogramConverterMSD.getInstance().convert(file, chromatogram, supplier.getId(), monitor);
+			ProcessingInfoPartSupport.getInstance().update(processingInfo);
 			data = processingInfo.getProcessingResult();
 		} finally {
 			monitor.done();

diff --git a/...c/org/eclipse/chemclipse/ux/extension/msd/ui/internal/support/DatabaseImportRunnable.java b/...c/org/eclipse/chemclipse/ux/extension/msd/ui/internal/support/DatabaseImportRunnable.java
@@ -1,5 +1,5 @@
 /*******************************************************************************
- * Copyright (c) 2018, 2023 Lablicate GmbH.
+ * Copyright (c) 2018, 2024 Lablicate GmbH.
  *
  * All rights reserved.
  * This program and the accompanying materials are made available under the
@@ -19,6 +19,7 @@
 import org.eclipse.chemclipse.msd.converter.database.DatabaseConverter;
 import org.eclipse.chemclipse.msd.model.core.IMassSpectra;
 import org.eclipse.chemclipse.processing.core.IProcessingInfo;
+import org.eclipse.chemclipse.processing.ui.support.ProcessingInfoPartSupport;
 import org.eclipse.core.runtime.IProgressMonitor;
 import org.eclipse.jface.operation.IRunnableWithProgress;
 
@@ -44,13 +45,12 @@ public void run(final IProgressMonitor monitor) throws InvocationTargetException
 		try {
 			monitor.beginTask("Import Database", IProgressMonitor.UNKNOWN);
 			IProcessingInfo<IMassSpectra> processingInfo = DatabaseConverter.convert(file, monitor);
+			ProcessingInfoPartSupport.getInstance().update(processingInfo);
 			massSpectra = processingInfo.getProcessingResult();
 		} catch(Exception e) {
 			/*
 			 * Exceptions: FileNotFoundException
-			 * NoChromatogramConverterAvailableException
 			 * FileIsNotReadableException FileIsEmptyException
-			 * ChromatogramIsNullException
 			 */
 			logger.error(e);
 		} finally {

diff --git a/...g/eclipse/chemclipse/ux/extension/msd/ui/internal/support/MassSpectrumImportRunnable.java b/...g/eclipse/chemclipse/ux/extension/msd/ui/internal/support/MassSpectrumImportRunnable.java
@@ -1,5 +1,5 @@
 /*******************************************************************************
- * Copyright (c) 2013, 2020 Lablicate GmbH.
+ * Copyright (c) 2013, 2024 Lablicate GmbH.
  *
  * All rights reserved.
  * This program and the accompanying materials are made available under the
@@ -19,6 +19,7 @@
 import org.eclipse.chemclipse.msd.converter.massspectrum.MassSpectrumConverter;
 import org.eclipse.chemclipse.msd.model.core.IMassSpectra;
 import org.eclipse.chemclipse.processing.core.IProcessingInfo;
+import org.eclipse.chemclipse.processing.ui.support.ProcessingInfoPartSupport;
 import org.eclipse.core.runtime.IProgressMonitor;
 import org.eclipse.jface.operation.IRunnableWithProgress;
 
@@ -44,13 +45,12 @@ public void run(final IProgressMonitor monitor) throws InvocationTargetException
 		try {
 			monitor.beginTask("Import Mass Spectrum", IProgressMonitor.UNKNOWN);
 			IProcessingInfo<IMassSpectra> processingInfo = MassSpectrumConverter.convert(file, monitor);
+			ProcessingInfoPartSupport.getInstance().update(processingInfo);
 			massSpectra = processingInfo.getProcessingResult();
 		} catch(Exception e) {
 			/*
 			 * Exceptions: FileNotFoundException
-			 * NoChromatogramConverterAvailableException
 			 * FileIsNotReadableException FileIsEmptyException
-			 * ChromatogramIsNullException
 			 */
 			logger.warn(e);
 		} finally {

diff --git a/...c/org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/MethodImportRunnable.java b/...c/org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/MethodImportRunnable.java
@@ -1,5 +1,5 @@
 /*******************************************************************************
- * Copyright (c) 2018, 2023 Lablicate GmbH.
+ * Copyright (c) 2018, 2024 Lablicate GmbH.
  *
  * All rights reserved.
  * This program and the accompanying materials are made available under the
@@ -19,6 +19,7 @@
 import org.eclipse.chemclipse.logging.core.Logger;
 import org.eclipse.chemclipse.processing.core.IProcessingInfo;
 import org.eclipse.chemclipse.processing.methods.IProcessMethod;
+import org.eclipse.chemclipse.processing.ui.support.ProcessingInfoPartSupport;
 import org.eclipse.chemclipse.ux.extension.xxd.ui.l10n.ExtensionMessages;
 import org.eclipse.core.runtime.IProgressMonitor;
 import org.eclipse.jface.operation.IRunnableWithProgress;
@@ -46,6 +47,7 @@ public void run(final IProgressMonitor monitor) throws InvocationTargetException
 		try {
 			monitor.beginTask(ExtensionMessages.importProcessMethod, IProgressMonitor.UNKNOWN);
 			IProcessingInfo<IProcessMethod> processingInfo = MethodConverter.convert(file, monitor);
+			ProcessingInfoPartSupport.getInstance().update(processingInfo);
 			processMethod = processingInfo.getProcessingResult();
 		} catch(Exception e) {
 			logger.error(e);

diff --git a/.../src/org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/PCRExportRunnable.java b/.../src/org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/PCRExportRunnable.java
@@ -1,5 +1,5 @@
 /*******************************************************************************
- * Copyright (c) 2018, 2023 Lablicate GmbH.
+ * Copyright (c) 2018, 2024 Lablicate GmbH.
  * 
  * All rights reserved.
  * This program and the accompanying materials are made available under the
@@ -19,6 +19,7 @@
 import org.eclipse.chemclipse.pcr.model.core.IPlate;
 import org.eclipse.chemclipse.processing.converter.ISupplier;
 import org.eclipse.chemclipse.processing.core.IProcessingInfo;
+import org.eclipse.chemclipse.processing.ui.support.ProcessingInfoPartSupport;
 import org.eclipse.chemclipse.ux.extension.xxd.ui.l10n.ExtensionMessages;
 import org.eclipse.core.runtime.IProgressMonitor;
 import org.eclipse.jface.operation.IRunnableWithProgress;
@@ -50,6 +51,7 @@ public void run(final IProgressMonitor monitor) throws InvocationTargetException
 		try {
 			monitor.beginTask(ExtensionMessages.exportPlate, IProgressMonitor.UNKNOWN);
 			IProcessingInfo<File> processingInfo = PlateConverterPCR.convert(file, plate, supplier.getId(), monitor);
+			ProcessingInfoPartSupport.getInstance().update(processingInfo);
 			data = processingInfo.getProcessingResult();
 		} catch(Exception e) {
 			logger.error(e);

diff --git a/.../src/org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/PCRImportRunnable.java b/.../src/org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/PCRImportRunnable.java
@@ -1,5 +1,5 @@
 /*******************************************************************************
- * Copyright (c) 2018, 2023 Lablicate GmbH.
+ * Copyright (c) 2018, 2024 Lablicate GmbH.
  * 
  * All rights reserved.
  * This program and the accompanying materials are made available under the
@@ -18,6 +18,7 @@
 import org.eclipse.chemclipse.pcr.converter.core.PlateConverterPCR;
 import org.eclipse.chemclipse.pcr.model.core.IPlate;
 import org.eclipse.chemclipse.processing.core.IProcessingInfo;
+import org.eclipse.chemclipse.processing.ui.support.ProcessingInfoPartSupport;
 import org.eclipse.chemclipse.ux.extension.xxd.ui.l10n.ExtensionMessages;
 import org.eclipse.core.runtime.IProgressMonitor;
 import org.eclipse.jface.operation.IRunnableWithProgress;
@@ -45,6 +46,7 @@ public void run(final IProgressMonitor monitor) throws InvocationTargetException
 		try {
 			monitor.beginTask(ExtensionMessages.importPlate, IProgressMonitor.UNKNOWN);
 			IProcessingInfo<?> processingInfo = PlateConverterPCR.convert(file, monitor);
+			ProcessingInfoPartSupport.getInstance().update(processingInfo);
 			plate = (IPlate)processingInfo.getProcessingResult();
 		} catch(Exception e) {
 			logger.error(e);

diff --git a/.../org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/QuantDBImportRunnable.java b/.../org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/QuantDBImportRunnable.java
@@ -1,5 +1,5 @@
 /*******************************************************************************
- * Copyright (c) 2018, 2023 Lablicate GmbH.
+ * Copyright (c) 2018, 2024 Lablicate GmbH.
  *
  * All rights reserved.
  * This program and the accompanying materials are made available under the
@@ -19,6 +19,7 @@
 import org.eclipse.chemclipse.logging.core.Logger;
 import org.eclipse.chemclipse.model.quantitation.IQuantitationDatabase;
 import org.eclipse.chemclipse.processing.core.IProcessingInfo;
+import org.eclipse.chemclipse.processing.ui.support.ProcessingInfoPartSupport;
 import org.eclipse.chemclipse.ux.extension.xxd.ui.l10n.ExtensionMessages;
 import org.eclipse.core.runtime.IProgressMonitor;
 import org.eclipse.jface.operation.IRunnableWithProgress;
@@ -46,6 +47,7 @@ public void run(final IProgressMonitor monitor) throws InvocationTargetException
 		try {
 			monitor.beginTask(ExtensionMessages.importQuantitationDatabase, IProgressMonitor.UNKNOWN);
 			IProcessingInfo<IQuantitationDatabase> processingInfo = QuantDBConverter.convert(file, monitor);
+			ProcessingInfoPartSupport.getInstance().update(processingInfo);
 			quantitationDatabase = processingInfo.getProcessingResult();
 		} catch(Exception e) {
 			logger.error(e);

diff --git a/.../org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/ScanVSDImportRunnable.java b/.../org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/ScanVSDImportRunnable.java
@@ -16,6 +16,7 @@
 
 import org.eclipse.chemclipse.logging.core.Logger;
 import org.eclipse.chemclipse.processing.core.IProcessingInfo;
+import org.eclipse.chemclipse.processing.ui.support.ProcessingInfoPartSupport;
 import org.eclipse.chemclipse.ux.extension.xxd.ui.l10n.ExtensionMessages;
 import org.eclipse.chemclipse.vsd.converter.core.ScanConverterVSD;
 import org.eclipse.chemclipse.vsd.model.core.ISpectrumVSD;
@@ -45,6 +46,7 @@ public void run(final IProgressMonitor monitor) throws InvocationTargetException
 		try {
 			monitor.beginTask(ExtensionMessages.importScan, IProgressMonitor.UNKNOWN);
 			IProcessingInfo<?> processingInfo = ScanConverterVSD.convert(file, monitor);
+			ProcessingInfoPartSupport.getInstance().update(processingInfo);
 			spectrumVSD = (ISpectrumVSD)processingInfo.getProcessingResult();
 		} catch(Exception e) {
 			logger.error(e);

diff --git a/.../org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/ScanWSDImportRunnable.java b/.../org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/ScanWSDImportRunnable.java
@@ -17,6 +17,7 @@
 
 import org.eclipse.chemclipse.logging.core.Logger;
 import org.eclipse.chemclipse.processing.core.IProcessingInfo;
+import org.eclipse.chemclipse.processing.ui.support.ProcessingInfoPartSupport;
 import org.eclipse.chemclipse.ux.extension.xxd.ui.l10n.ExtensionMessages;
 import org.eclipse.chemclipse.wsd.converter.core.ScanConverterWSD;
 import org.eclipse.chemclipse.wsd.model.core.ISpectrumWSD;
@@ -46,11 +47,12 @@ public void run(final IProgressMonitor monitor) throws InvocationTargetException
 		try {
 			monitor.beginTask(ExtensionMessages.importScan, IProgressMonitor.UNKNOWN);
 			IProcessingInfo<?> processingInfo = ScanConverterWSD.convert(file, monitor);
+			ProcessingInfoPartSupport.getInstance().update(processingInfo);
 			spectrumWSD = (ISpectrumWSD)processingInfo.getProcessingResult();
 		} catch(Exception e) {
 			logger.error(e);
 		} finally {
 			monitor.done();
 		}
 	}
-}
+}
diff --git a/...org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/SequenceImportRunnable.java b/...org/eclipse/chemclipse/ux/extension/xxd/ui/internal/runnables/SequenceImportRunnable.java
@@ -1,5 +1,5 @@
 /*******************************************************************************
- * Copyright (c) 2018, 2023 Lablicate GmbH.
+ * Copyright (c) 2018, 2024 Lablicate GmbH.
  *
  * All rights reserved.
  * This program and the accompanying materials are made available under the
@@ -20,6 +20,7 @@
 import org.eclipse.chemclipse.converter.sequence.SequenceConverter;
 import org.eclipse.chemclipse.logging.core.Logger;
 import org.eclipse.chemclipse.processing.core.IProcessingInfo;
+import org.eclipse.chemclipse.processing.ui.support.ProcessingInfoPartSupport;
 import org.eclipse.chemclipse.ux.extension.xxd.ui.l10n.ExtensionMessages;
 import org.eclipse.core.runtime.IProgressMonitor;
 import org.eclipse.core.runtime.SubMonitor;
@@ -49,6 +50,7 @@ public void run(final IProgressMonitor monitor) throws InvocationTargetException
 		try {
 			subMonitor.worked(1);
 			IProcessingInfo<ISequence<? extends ISequenceRecord>> processingInfo = SequenceConverter.convert(file, monitor);
+			ProcessingInfoPartSupport.getInstance().update(processingInfo);
 			sequence = processingInfo.getProcessingResult();
 			subMonitor.worked(2);
 		} catch(Exception e) {