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{bio}[foss/2022a] FunGAP v1.1.1 w/ Python 3.10.4 #17652

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merged 4 commits into from
Apr 6, 2023
Merged

{bio}[foss/2022a] FunGAP v1.1.1 w/ Python 3.10.4 #17652

merged 4 commits into from
Apr 6, 2023

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lexming
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@lexming lexming commented Apr 4, 2023

(created using eb --new-pr)

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adding easyconfigs: FunGAP-1.1.1-foss-2022a.eb and patches: FunGAP-1.…
d4392f2 
…1.1_fix-snap-detection.patch, FunGAP-1.1.1_relax-dependency-checks.patch, FunGAP-1.1.1_replace-deprecated-pa-repeatmodeler.patch, FunGAP-1.1.1_fix-maker-exes.patch, FunGAP-1.1.1_fix-augustus-calls-in-runbreaker.patch
@lexming lexming added the new label Apr 4, 2023
@lexming lexming mentioned this pull request Apr 4, 2023
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lexming commented Apr 4, 2023

@boegelbot: please test @ generoso

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@lexming: Request for testing this PR well received on login1

PR test command 'EB_PR=17652 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17652 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 10587

Test results coming soon (I hope)...

- notification for comment with ID 1495611235 processed

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it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
FAILED
Build succeeded for 0 out of 1 (1 easyconfigs in total)
cns2 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/920717b1f6a353052798d3be0ea0ec4f for a full test report.

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lexming commented Apr 4, 2023

@boegelbot: please test @ generoso

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@lexming: Request for testing this PR well received on login1

PR test command 'EB_PR=17652 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17652 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 10588

Test results coming soon (I hope)...

- notification for comment with ID 1496319679 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns2 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/bb006ce66cc1a87d3f4d713cb6281b0f for a full test report.

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lexming commented Apr 4, 2023

@boegelbot please test @ jsc-zen2

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@lexming: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=17652 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_17652 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 2446

Test results coming soon (I hope)...

- notification for comment with ID 1496328653 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
FAILED
Build succeeded for 0 out of 1 (1 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/b3d5f1c4b4927f85a73e7a07b0bd01ca for a full test report.

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lexming commented Apr 5, 2023

@boegelbot: please test @ generoso

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@lexming: Request for testing this PR well received on login1

PR test command 'EB_PR=17652 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17652 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 10594

Test results coming soon (I hope)...

- notification for comment with ID 1497067251 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns2 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/7816cda7524dd89d1290badf395e2299 for a full test report.

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lexming commented Apr 5, 2023

@boegelbot please test @ jsc-zen2

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@lexming: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=17652 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_17652 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 2455

Test results coming soon (I hope)...

- notification for comment with ID 1497075713 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@boegelbot
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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/ab21ebfc50f61efc250c03a8be51e7ea for a full test report.

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lexming commented Apr 5, 2023

ok, this one is ready ✔️

smoors
smoors approved these changes Apr 6, 2023
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lgtm

@smoors smoors added this to the next release (4.7.2?) milestone Apr 6, 2023
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smoors commented Apr 6, 2023

Going in, thanks @lexming!

@smoors smoors merged commit 3e634ac into easybuilders:develop Apr 6, 2023
@lexming lexming deleted the 20230404103432_new_pr_FunGAP111 branch April 8, 2023 23:12
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