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Merge pull request #19517 from pavelToman/20240108134212_new_pr_MiXCR460
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{bio}[system/system] MiXCR v4.6.0 w/ Java 17
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smoors authored Jan 10, 2024
2 parents 5d926da + 5fbba1d commit 617f1a0
Showing 1 changed file with 28 additions and 0 deletions.
28 changes: 28 additions & 0 deletions easybuild/easyconfigs/m/MiXCR/MiXCR-4.6.0-Java-17.eb
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easyblock = 'Tarball'

name = 'MiXCR'
version = '4.6.0'
versionsuffix = '-Java-%(javaver)s'

homepage = 'https://milaboratory.com/software/mixcr'
description = """MiXCR is a universal software for fast and accurate extraction of T- and B- cell receptor repertoires
from any type of sequencing data."""

toolchain = SYSTEM

source_urls = ['https://github.com/milaboratory/mixcr/releases/download/v%(version)s/']
sources = [SOURCELOWER_ZIP]
checksums = ['05db1276951a2e656d0a7bf4e2b1fff326733a5f961a9d4829be139852fabe13']

dependencies = [('Java', '17')]

sanity_check_paths = {
'files': ['mixcr', 'mixcr.jar'],
'dirs': [],
}

sanity_check_commands = ["mixcr -v"]

modextrapaths = {'PATH': ''}

moduleclass = 'bio'

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