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Update develop-ref after #2082#2084

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Merged

JohnHalleyGotway merged 179 commits intodevelop-refdtcenter/MET:develop-reffrom developdtcenter/MET:developCopy head branch name to clipboardMar 3, 2022

+58-6

Commits

Commits on Oct 26, 2021

• Per #1906, modify code to pass entire path to make_temp_file_name instead of only the filename so that the function can tell whether or not the file exists. (#1952)

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  jprestop

  and

  Julie Prestopnik

  authored
  9437447

Commits on Nov 3, 2021

• Feature 1761 percent thresh (#1956)

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  3 peopleauthored
  8c446ff

• Feature 1905 ens_ctrl (#1955)

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  JohnHalleyGotway

  and

  j-opatz

  authored
  d60924c

• Hotfix after merging changing for #1761. Updating the list of expected output files.

  JohnHalleyGotway

  committed
  3b13ce1

• Per #1905, committing a hotfix directly to the develop branch. Reverting the logic for computing the ensemble range back to what it was previously. The new version produced very slight differences …

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  JohnHalleyGotway

  committed
  5131042

Commits on Nov 4, 2021

• Feature 1957 ascii2nc_python (#1958)

  JohnHalleyGotway

  authored
  4ff28d1

Commits on Nov 15, 2021

• Feature 1949 cf netcdf documentaton (#1951)

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  hsoh-u

  and

  Howard Soh

  authored
  aee6269

• Feature 1968 ens_ctrl (#1969)

  JohnHalleyGotway

  authored
  867360f

Commits on Nov 16, 2021

• Feature 1809 gen prob (#1967)

  JohnHalleyGotway

  authored
  0990061

• Merge branch 'develop-ref' into develop

  JohnHalleyGotway

  committed
  1663bb6

• Feature 1970 v10.1.0-beta4 (#1973)

  JohnHalleyGotway

  authored
  13996c2

Commits on Nov 17, 2021

• Fix tiny typo in plot_data_plane usage statement.

  JohnHalleyGotway

  committed
  dae9db7

• Hotfix for the develop branch to get met-10.1.0-beta4 compiling on WCOSS. The intel compiler does not allow adjacent >> characters when defining maps.

  JohnHalleyGotway

  committed
  9bd9946

• Updating the beta4 release date from 11/16 to 11/17 since the beta4 release needs to be recreated.

  JohnHalleyGotway

  committed
  e0b659d

Commits on Nov 19, 2021

• Update the MET PR template to list expected changes up front.

  JohnHalleyGotway

  committed
  817d9db

Commits on Nov 22, 2021

• Bugfix 1976 develop cdist (#1979)

  JohnHalleyGotway

  authored
  4e28ae7

Commits on Nov 23, 2021

• Merge branch 'develop-ref' into develop

  JohnHalleyGotway

  committed
  6d16e23

Commits on Nov 29, 2021

• #1936 Excludes precip3hr, precip6hr, precip12hr, and precip10min from required variables for MESONET

  

  Howard Soh

  committed
  39a5233

Commits on Dec 1, 2021

• Per #1985, correcting typo found while creating V10.0.1 in the develop branch as well.

  JohnHalleyGotway

  committed
  c9434e8

• Per #1985, VERY minor change to fix alignment of titles in Point-Stat... updating the develop branch.

  JohnHalleyGotway

  committed
  84f8c7f

• #1936 Added an unit test for newer MESONET file

  

  Howard Soh

  committed
  d35190e

Commits on Dec 2, 2021

• Merge pull request #1984 from dtcenter/feature_1936_madis_nc2

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  hsoh-u

  authored
  f81d250

Commits on Dec 13, 2021

• Feature 1989 sort (#1990)

  JohnHalleyGotway

  authored
  8c29f09

• Feature 1991 VCNT (#1992)

  JohnHalleyGotway

  authored
  b93f4ea

• Feature 1993 grid_mask (#1994)

  JohnHalleyGotway

  authored
  49fb555

Commits on Dec 28, 2021

• #1844 Added vx_pointdata_python

  

  Howard Soh

  committed
  dd0a68b

• #1844 Added vx_pointdata_python to PYTHON_LIBS & make file for vx_pointdata_python

  

  Howard Soh

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  2b61506

• #1844 Added vx_pointdata_python to SUBDIRS

  

  Howard Soh

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  b4a4e18

• #1844 Initial release

  

  Howard Soh

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  ba9f81e

• #1844 Added met_point_data.cc & met_point_data.h

  

  Howard Soh

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  abef2b7

• #1844 NcHeaderData is renamed to MetPointHeader and moved to met_point_dataq.h

  

  Howard Soh

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  6c36d79

• #1844 NcPointObsData is derived from MetPointObsData. Many methods are moved to the base class MetPointObsData

  

  Howard Soh

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  3f0de5e

• #1844 Moved varianbles and methods to the base class MetPointData

  

  Howard Soh

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  6c50d50

• #1844 override the obs_data pointer to the derived class

  

  Howard Soh

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  0d7b731

• #1844 Added pyobject_as_bool & pyobject_as_string_array

  

  Howard Soh

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  b053f71

• #1844 Cleanup include statements and addpointdata_python.h if python is enabled

  

  Howard Soh

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  0ecea6e

• #18443 Support python embedding

  

  Howard Soh

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  e397fa1

• #1844 Initial release

  

  Howard Soh

  committed
  315d3b4

Commits on Dec 29, 2021

• #1844 Make buf_size const

  

  Howard Soh

  committed
  95a65ed

Commits on Jan 5, 2022

• Add GitHub Actions workflow to trigger METplus testing workflow (#2002)

  georgemccabe

  authored
  e900334

• changed names of inputs to send to METplus to match changes to METplus repo

  georgemccabe

  committed
  1c981f4

Commits on Jan 7, 2022

• #1965 Excludes the duplicated variable names from multiple input files

  

  Howard Soh

  committed
  0273cf1

Commits on Jan 11, 2022

• #1965 Processed with the raw variable names and update them when the output is saved.

  

  Howard Soh

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  ab1199b

• #1965 Added unit test ioda2nc_same_input

  

  Howard Soh

  committed
  d5cc7b1

• #1965 Processed with the raw variable names and update them when the output is saved.

  

  Howard Soh

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  e48c5ff

• #1965 Added unit test ioda2nc_same_input

  

  Howard Soh

  committed
  5617aa2

Commits on Jan 12, 2022

• #1965 initialize var_idx

  hsoh-u

  authored
  ee76143

• Merge pull request #2006 from dtcenter/feature_1965_ioda2nc_same_input

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  hsoh-u

  authored
  1e97085

• Update the development environment for seneca to add /usr/local/nco/bin and /usr/local/netcdf/bin to the path. Also define MET_TEST_RSCRIPT to point to a new enough version of RSCRIPT that has the …

  Show description for acbb7b9
  

  John Halley Gotway

  committed
  acbb7b9

• Merge branch 'develop' of https://github.com/dtcenter/MET into develop

  JohnHalleyGotway

  committed
  717dd17

• send email address of user who triggered event to METplus workflow as input

  georgemccabe

  committed
  58988bf

• Merge branch 'develop' of github.com:dtcenter/MET into develop

  georgemccabe

  committed
  5632c5c

• Fixup the Rscript diffing logic to support running the nightly build on seneca. The problem here is that the ncdiff -x -v command line options that worked in version 4.7.0 NO LONGER work in 4.9.2. …

  Show description for b267883
  JohnHalleyGotway

  committed
  b267883

• Merge branch 'develop' of https://github.com/dtcenter/MET into develop

  JohnHalleyGotway

  committed
  d7eb8e4

• No real changes here. Just formatting

  

  MET Tools Test Account

  committed
  96536f5

• Feature 1974 message_type_group_map (#1999)

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  3 peopleauthored
  fa41760

• Feature 1996 uninitialized variables (#2004)

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  3 peopleauthored
  551f92b

• Merge remote-tracking branch 'origin/develop' into feature_1844_python_embedding

  

  Howard Soh

  committed
  39d7e6f

• Feature 1695 ensemble single file (gen_ens_prod) (#2001)

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  georgemccabe

  and

  JohnHalleyGotway

  authored
  dbc7d10

• Feature 1965 NB faile with time summary by ioda2nc (#2008)

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  hsoh-u

  and

  Howard Soh

  authored
  be7910e

Commits on Jan 13, 2022

• Feature 1810 shapes (#2005)

  JohnHalleyGotway

  authored
  1e13dea

• #1844 Added log message for use_var_id

  

  Howard Soh

  committed
  edd61fd

• #1844 Get use_var_id for python embedding

  

  Howard Soh

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  6cae6b5

• #1844 Initial release

  

  Howard Soh

  committed
  aaa1010

• #1844 Added met_point_obs.py and read_met_point_obs.py

  

  Howard Soh

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  adf4928

• #1844 Added 4 unit test for python embedding of MET point data

  

  Howard Soh

  committed
  0640d8d

• Merge remote-tracking branch 'origin/develop' into feature_1844_python_embedding

  

  Howard Soh

  committed
  9483487

• More changes to test_util.R to account for differences between 4.7.0 and 4.9.2 of ncdiff. The earlier version reported 0 diffs for the time_bounds, lat, lon, latitude, and longitude variables while…

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  JohnHalleyGotway

  committed
  37f4f32

• Fix merge conflict

  JohnHalleyGotway

  committed
  36761b6

• #1844 Added python embedding for point observation data

  

  Howard Soh

  committed
  4f57edd

• Merge remote-tracking branch 'origin/develop' into feature_1844_python_embedding

  

  Howard Soh

  committed
  27925d8

• Feature 1926 gridstat openmp (#1977)

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  3 peopleauthored
  de81526

Commits on Jan 14, 2022

• feature 1695 ensemble single file (ensemble_stat) (#2007)

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  georgemccabe

  and

  JohnHalleyGotway

  authored
  e96a211

• Committing directly to the develop branch. Removing many, many instances of MET_BUILD_BASE and a couple instances of MET_BASE from the examples listed in Appendix A. The inconsistent use of these v…

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  JohnHalleyGotway

  committed
  032456b

Commits on Jan 15, 2022

• feature 2011 v10.1.0-beta5 (#2014)

  JohnHalleyGotway

  authored
  ee4a3a4

• feature 1695 fix issues with ensemble changes (#2012)

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  3 peopleauthored
  18ccf3a

• Merge branch 'develop-ref' into develop

  JohnHalleyGotway

  committed
  634806e

Commits on Jan 16, 2022

• Hotfix for #1695 committed directly to the develop branch. The new Ensemble-Stat config files added for this issue don't define a random number generator seed. This results in different output for …

  Show description for e9df2fc
  JohnHalleyGotway

  committed
  e9df2fc

Commits on Jan 17, 2022

• Merge branch 'develop-ref' into develop

  JohnHalleyGotway

  committed
  e75fe46

Commits on Jan 18, 2022

• Adding George to email list for the nightly build.

  JohnHalleyGotway

  committed
  65539e1

• Merge branch 'develop' into feature_1844_python_embedding

  JohnHalleyGotway

  committed
  ee621eb

Commits on Jan 20, 2022

• Fix the links for the met-10.1.0-beta5 release notes.

  JohnHalleyGotway

  committed
  7c18231

• Merge remote-tracking branch 'origin/develop' into feature_1844_python_embedding

  

  Howard Soh

  committed
  3bd3cb3

Commits on Jan 21, 2022

• #1844 Make met_point_obs as abstract class

  

  Howard Soh

  committed
  b8e0de3

• #1844 correctedb for loop end condition on processing obs bdata

  

  Howard Soh

  committed
  29d479f

Commits on Jan 24, 2022

• Feature 1546 unit_tests (#2021)

  JohnHalleyGotway

  authored
  333419c

Commits on Jan 25, 2022

• #2020 Added SonarQube related varibales

  

  Howard Soh

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  b177c3b

• #2020 Initial release

  

  Howard Soh

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  11daa46

• #2015 Avoid the repeasted debug message if derived varibales are disabled

  

  Howard Soh

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  89642fc

• #1996 Initialize right and left

  

  Howard Soh

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  6b9b411

• #1966 Call clear() instead of reset memory for Header variable

  

  Howard Soh

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  b606312

• #1966 Make sure the levels from variable does not exceed the maxLevel

  

  Howard Soh

  committed
  4142c48

• #1966 Removed unreachable codes

  

  Howard Soh

  committed
  c4f5a1b

• #1966 Do not write into NetcDF if empty data

  

  Howard Soh

  committed
  4226cbe

• Merge branch 'develop' into feature_1844_python_embedding

  JohnHalleyGotway

  committed
  dd9c46c

Commits on Jan 26, 2022

• Merge pull request #2010 from dtcenter/feature_1844_python_embedding

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  hsoh-u

  authored
  7aaddba

Commits on Jan 27, 2022

• #2015 Corrected "retained or derived" count

  

  Howard Soh

  committed
  587b936

• Merge pull request #2024 from dtcenter/feature_2020_run_sonarqube

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  hsoh-u

  authored
  cfb4759

• Merge pull request #2026 from dtcenter/feature_2015_pb2nc_debug_message

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  hsoh-u

  authored
  80f79fd

• Feature 1546 CI testing (#2029)

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  georgemccabe

  and

  JohnHalleyGotway

  authored
  3097278

• Merge branch 'develop-ref' into develop

  JohnHalleyGotway

  committed
  d9447e9

• fixed broken workflow by setting environment variable expected for docker build script

  georgemccabe

  committed
  42ca71a

• add missing docker tag from push command

  georgemccabe

  committed
  5939357

• added correct docker tag value

  georgemccabe

  committed
  1e7551f

• fixed incorrect truth data version for updating -ref reference data

  georgemccabe

  committed
  afe0ad4

• Merge branch 'develop-ref' into develop

  georgemccabe

  committed
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Commits on Jan 28, 2022

• Updating develop with changes to the unit tests names. Renaming unit_test.yml to a more generic testing.yml name since it compiles AND/OR runs unit tests. Also make the job names more concise so it…

  Show description for 555494b
  JohnHalleyGotway

  committed
  555494b

• fixed directory to copy truth data into -- copy command was copying the content of the directory, not including the directory itself

  georgemccabe

  committed
  ece4c3a

• git push origin develop0;136;0cMerge branch 'develop-ref' into develop

  georgemccabe

  committed
  afdf9db

Commits on Jan 31, 2022

• Per #1907, added warning about switch from Ensemble-Stat to Gen-Ens-Prod (#2032)

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  jprestop

  and

  Julie Prestopnik

  authored
  82d45a9

Commits on Feb 1, 2022

• 2028 Check null for header data

  

  Howard Soh

  committed
  5dfcf5b

• Removed un-reachable code

  

  Howard Soh

  committed
  c767e8f

• #2028 Check if the pointer (d) is null

  

  Howard Soh

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  310c236

• #2015 Changed warning to debug message

  

  Howard Soh

  committed
  fa5badf

• #2028 Passing two dimensionl cur and dim array

  

  Howard Soh

  committed
  df00576

Commits on Feb 2, 2022

• #2028 Set obs_data

  

  Howard Soh

  committed
  206f74a

• Merge pull request #2035 from dtcenter/feature_2028_madis2nc_profiler_qc

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  hsoh-u

  authored
  4da5850

• Feature 2003 briercl (#2034)

  JohnHalleyGotway

  authored
  917c300

Commits on Feb 3, 2022

• do not run testing workflow if changes are isolated to the met/docs directory

  georgemccabe

  committed
  abdc436

• Per #2013, changed source and README. ci-run-unit (#2039)

  davidalbo

  authored
  4a31d4f

Commits on Feb 8, 2022

• Feature 1055 read rot latlon (#2041)

  JohnHalleyGotway

  authored
  872e2e4

• Merge branch 'develop-ref' into develop

  JohnHalleyGotway

  committed
  221e148

Commits on Feb 9, 2022

• #2044 Renamed obs_prefbufr_map to obs_prepbufr_map (typo)

  

  Howard Soh

  committed
  6ec6e71

• #1996 Initialize i_point

  

  Howard Soh

  committed
  b4ec7b8

Commits on Feb 10, 2022

• #2044 Corrected config key for obs_prefbufr_map and give a warning for using the old key

  

  Howard Soh

  committed
  fa3896d

• CI: output summary of differences in GHA log to easily see results without having to download the log artifact

  georgemccabe

  committed
  9c45689

• #2027 Added a debug message

  

  Howard Soh

  committed
  b2e7276

• #2027 ci-run-unit Changed wind thres

  

  Howard Soh

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  c9ba6f1

• Merge remote-tracking branch 'origin/develop' into feature_2027_grid_stat_wind_direction

  

  Howard Soh

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  6cd0b12

• #2027 ci-run-unit Increased the precision to debug message

  

  Howard Soh

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  c1b2022

• print end of script after error summary, ci-run-unit

  georgemccabe

  committed
  47bfef6

• #2027 Increased the buffer and cheking the status of sprintf

  

  Howard Soh

  committed
  348d05e

• Merge branch 'feature_2027_grid_stat_wind_direction' of github.com:dtcenter/MET into feature_2027_grid_stat_wind_direction

  

  Howard Soh

  committed
  e9e5a52

Commits on Feb 11, 2022

• Feature 1998 standard sections (#2038)

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  lisagoodrich

  and

  jprestop

  authored
  a79cd9b

• #2044 parse_conf_obs_bufr_map is moved to pb2nc_conf_info.c

  

  Howard Soh

  committed
  f4e1f7f

• #2044 parse_conf_obs_bufr_map is moved to pb2nc_conf_info.c

  

  Howard Soh

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  3b88ab1

• #2044 Changed debiug level for PBL

  

  Howard Soh

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  4020d35

• #2044 ci-run-unit Give warning if bad connfig key is used

  

  Howard Soh

  committed
  42aad8a

• Update met_stats.cc

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  hsoh-u

  authored
  ceacf2a

• Update met_stats.cc

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  JohnHalleyGotway

  authored
  5437e5f

• Feature 2040 parse timing (#2048)

  Show description for 67b484c
  

  JohnHalleyGotway

  and

  Julie Prestopnik

  authored
  67b484c

• Merge pull request #2047 from dtcenter/feature_2027_grid_stat_wind_direction

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  hsoh-u

  authored
  0f25d3c

• #2033 ci-run-test Initial release

  

  Howard Soh

  committed
  ae13219

• CI: Add logic to auto update input data (#2046)

  georgemccabe

  authored
  1d56b26

• Bugfix 2045 develop hira (#2049)

  JohnHalleyGotway

  authored
  39a50c1

• #2044 ci-run-test merge again

  

  Howard Soh

  committed
  ce3582d

Commits on Feb 15, 2022

• Feature 2040 patch (#2053)

  JohnHalleyGotway

  authored
  fd95301

Commits on Feb 17, 2022

• For #2044, fix a typo in PB2NCConfig_G212. A commented out obs_bufr_var entry should really be obs_bufr_map and not commented out.

  JohnHalleyGotway

  committed
  1852dae

• Merge pull request #2050 from dtcenter/feature_2044_pb2nc_config

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  hsoh-u

  authored
  6b2134d

Commits on Feb 18, 2022

• print docker build log to GHA log if build fails

  georgemccabe

  committed
  418ebe7

• Feature 1824 pb2nc mlcape (#2057)

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  hsoh-u

  and

  Howard Soh

  authored
  0d04d0d

• Feature 1583 es hira (#2056)

  JohnHalleyGotway

  authored
  a2a7372

Commits on Feb 19, 2022

• Merge branch 'develop-ref' into develop

  JohnHalleyGotway

  committed
  e1160cf

• #1824 ci-run-test Reset itype to 1 for regular CAPE

  

  Howard Soh

  committed
  10ca15c

Commits on Feb 20, 2022

• Merge pull request #2060 from dtcenter/feature_1824_pb2nc_MLCAPE2

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  hsoh-u

  authored
  fd9e63c

Commits on Feb 22, 2022

• SonarQube: check if pd_ptr is null

  

  Howard Soh

  committed
  6b78a89

• #1824 Initialize cape_cnt_surface_msgs

  

  Howard Soh

  committed
  1d58705

• ci-run-test Removed trailing spaces

  

  Howard Soh

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  946e4ec

• Modified the PR template to add review of the source issue metadata ci-skip-all

  

  Julie Prestopnik

  committed
  f74ac2a

Commits on Feb 23, 2022

• feature_2054_helpEmailChanges (#2064)

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  davidalbo

  and

  jprestop

  authored
  2c4e4af

• Merge pull request #2065 from dtcenter/feature_1824_pb2nc_MLCAPE2

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  hsoh-u

  authored
  ba71e4c

• Feature set job controls (#2066)

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  jprestop

  and

  Julie Prestopnik

  authored
  36bdf26

• Feature 1918 std climo (#2061)

  JohnHalleyGotway

  authored
  ab26b48

Commits on Feb 24, 2022

• Merge branch 'develop-ref' into develop

  JohnHalleyGotway

  committed
  005da64

• Feature 2070 obs_prepbufr_map (#2071)

  JohnHalleyGotway

  authored
  30ad6b6

Commits on Feb 25, 2022

• #1996 simplify the retrun statement (no effect with tf_left at the second return

  

  Howard Soh

  committed
  eccbb38

• #1996 Add null terminator only if the pointer is not NULL

  

  Howard Soh

  committed
  37aef73

• #1996 Reduced duplicated for loops

  

  Howard Soh

  committed
  543370e

• #1996 Removed IsSet which is defined at the base class

  

  Howard Soh

  committed
  4471c4a

• #1996 Initialize the variable

  

  Howard Soh

  committed
  c5a80d5

• #1996 ci-run-test Initialize the variable, nxy

  

  Howard Soh

  committed
  40569ff

Commits on Mar 1, 2022

• Merge branch 'develop' into feature_1996_sonarqube_findings2

  JohnHalleyGotway

  committed
  b55b5c9

• Merge pull request #2073 from dtcenter/feature_1996_sonarqube_findings2

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  hsoh-u

  authored
  7d63e0f

Commits on Mar 2, 2022

• Feature 1918 climo_ens_member_id (#2075)

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  JohnHalleyGotway

  and

  j-opatz

  authored
  107ac32

• Merge branch 'develop-ref' into develop

  JohnHalleyGotway

  committed
  2eb1158

• Feature 1259 es_prob_stats (#2067)

  JohnHalleyGotway

  authored
  514c0c3

• Feature 2078 v10.1.0-beta6 (#2079)

  JohnHalleyGotway

  authored
  ddb3a3b

Commits on Mar 3, 2022

• Feature 1259 BIN_MEAN OBS_THRESH (#2082)

  JohnHalleyGotway

  authored
  591cbd2

• Merge branch 'develop-ref' into develop

  JohnHalleyGotway

  committed
  43c7dad