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@dienerlab

Diener Lab

Our lab at the Meduni Graz.

We are a lab led by Christian Diener at the Medical University of Graz and study the human gut microbiome through an approach that combines ecology, systems biology, and metabolism. We are also big fans of equitable and accessible Science and participate in various efforts to share our research, software, and teaching materials.

Like us, microbes rarely live alone and may behave quite differently when around others or in a new environment. We are interested in the complex metabolic interactions taking place between microbes, the host, and their environment, and how those can be leveraged to understand and design complex microbial communities. We mainly use computational strategies but also run experiments in our wetlab.

The lab forms part of the Austrian FWF Cluster of Excellence Microbiomes Drive Planetary Health and collaborates with other researchers and industry all across the globe. If you are interested in learning more feel free to check out our team, lab values, research areas, and publications.

📕 wiki

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  1. pipelines pipelines Public

    A monorepo containing all of our Nextflow pipelines.

    Nextflow 1

  2. website website Public

    Our lab website.

    HTML

  3. miso miso Public

    An R package containing a bunch of helpers for microbiome data analysis.

    R

Repositories

Showing 9 of 9 repositories
  • miso Public

    An R package containing a bunch of helpers for microbiome data analysis.

    dienerlab/miso’s past year of commit activity
    R 0 Apache-2.0 0 0 0 Updated Dec 3, 2024
  • pipelines Public

    A monorepo containing all of our Nextflow pipelines.

    dienerlab/pipelines’s past year of commit activity
    Nextflow 1 Apache-2.0 0 0 0 Updated Nov 22, 2024
  • gapseq-docker Public Forked from Gibbons-Lab/gapseq-docker

    A docker image for gapseq.

    dienerlab/gapseq-docker’s past year of commit activity
    Dockerfile 0 Apache-2.0 1 0 0 Updated Nov 21, 2024
  • .github Public

    Lab manuals, policies and highlights.

    dienerlab/.github’s past year of commit activity
    Shell 0 0 0 0 Updated Sep 13, 2024
  • talks Public

    Repository for public talk slides.

    dienerlab/talks’s past year of commit activity
    JavaScript 1 Apache-2.0 0 0 0 Updated Sep 11, 2024
  • website Public

    Our lab website.

    dienerlab/website’s past year of commit activity
    HTML 0 Apache-2.0 0 0 0 Updated Aug 20, 2024
  • medi Public Forked from Gibbons-Lab/medi

    Metagenomic Estimation of Dietary Intake and Content.

    dienerlab/medi’s past year of commit activity
    R 0 Apache-2.0 4 0 0 Updated Jul 29, 2024
  • nextflow_intro Public

    Intro to Nextflow and instructions on how to run pipelines at the MedUni Graz.

    dienerlab/nextflow_intro’s past year of commit activity
    Nextflow 0 Apache-2.0 0 0 0 Updated May 17, 2024
  • 2024_micom_intro Public

    A short intro to MICOM.

    dienerlab/2024_micom_intro’s past year of commit activity
    Jupyter Notebook 1 Apache-2.0 0 0 0 Updated Apr 5, 2024

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