Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Extend meta data support for SQLDocumentStore #2199

Merged
merged 17 commits into from
Feb 21, 2022
Merged
Show file tree
Hide file tree
Changes from 8 commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
60 changes: 58 additions & 2 deletions haystack/document_stores/filter_utils.py
Original file line number Diff line number Diff line change
@@ -1,6 +1,12 @@
from typing import Union, List, Dict
from abc import ABC, abstractmethod
from collections import defaultdict
from functools import reduce

from haystack.utils.import_utils import safe_import
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

I can't see where safe_import is used.

Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

You are right, this import is unnecessary. I've removed it now.

from haystack.document_stores.sql import MetaDocumentORM
from sqlalchemy.sql import select
from sqlalchemy import and_, or_


def nested_defaultdict():
Expand Down Expand Up @@ -122,6 +128,13 @@ def convert_to_elasticsearch(self):
"""
pass

@abstractmethod
def convert_to_sql(self):
"""
Converts the LogicalFilterClause instance to an SQL filter.
"""
pass

def _merge_es_range_queries(self, conditions: List[Dict]) -> List[Dict]:
"""
Merges Elasticsearch range queries that perform on the same metadata field.
Expand Down Expand Up @@ -187,6 +200,13 @@ def convert_to_elasticsearch(self):
"""
pass

@abstractmethod
def convert_to_sql(self):
"""
Converts the ComparisonOperation instance to an SQL filter.
"""
pass


class NotOperation(LogicalFilterClause):
"""
Expand All @@ -197,7 +217,11 @@ def convert_to_elasticsearch(self):
conditions = [condition.convert_to_elasticsearch() for condition in self.conditions]
conditions = self._merge_es_range_queries(conditions)
return {"bool": {"must_not": conditions}}


def convert_to_sql(self):
conditions = [MetaDocumentORM.document_id.in_(condition.convert_to_sql()) for condition in self.conditions]
return select(MetaDocumentORM.document_id).filter(~or_(*conditions))


class AndOperation(LogicalFilterClause):
"""
Expand All @@ -208,7 +232,11 @@ def convert_to_elasticsearch(self):
conditions = [condition.convert_to_elasticsearch() for condition in self.conditions]
conditions = self._merge_es_range_queries(conditions)
return {"bool": {"must": conditions}}


def convert_to_sql(self):
conditions = [MetaDocumentORM.document_id.in_(condition.convert_to_sql()) for condition in self.conditions]
return select(MetaDocumentORM.document_id).filter(and_(*conditions))


class OrOperation(LogicalFilterClause):
"""
Expand All @@ -219,6 +247,10 @@ def convert_to_elasticsearch(self):
conditions = [condition.convert_to_elasticsearch() for condition in self.conditions]
conditions = self._merge_es_range_queries(conditions)
return {"bool": {"should": conditions}}

def convert_to_sql(self):
conditions = [MetaDocumentORM.document_id.in_(condition.convert_to_sql()) for condition in self.conditions]
return select(MetaDocumentORM.document_id).filter(or_(*conditions))


class EqOperation(ComparisonOperation):
Expand All @@ -228,6 +260,9 @@ class EqOperation(ComparisonOperation):

def convert_to_elasticsearch(self):
return {"term": {self.field_name: self.comparison_value}}

def convert_to_sql(self):
return select([MetaDocumentORM.document_id]).where(MetaDocumentORM.name == self.field_name, MetaDocumentORM.value == self.comparison_value)


class InOperation(ComparisonOperation):
Expand All @@ -237,6 +272,9 @@ class InOperation(ComparisonOperation):

def convert_to_elasticsearch(self):
return {"terms": {self.field_name: self.comparison_value}}

def convert_to_sql(self):
return select([MetaDocumentORM.document_id]).where(MetaDocumentORM.name == self.field_name, MetaDocumentORM.value.in_(self.comparison_value))


class NeOperation(ComparisonOperation):
Expand All @@ -247,6 +285,9 @@ class NeOperation(ComparisonOperation):
def convert_to_elasticsearch(self):
return {"bool": {"must_not": {"term": {self.field_name: self.comparison_value}}}}

def convert_to_sql(self):
return select([MetaDocumentORM.document_id]).where(MetaDocumentORM.name == self.field_name, MetaDocumentORM.value != self.comparison_value)


class NinOperation(ComparisonOperation):
"""
Expand All @@ -255,6 +296,9 @@ class NinOperation(ComparisonOperation):

def convert_to_elasticsearch(self):
return {"bool": {"must_not": {"terms": {self.field_name: self.comparison_value}}}}

def convert_to_sql(self):
return select([MetaDocumentORM.document_id]).where(MetaDocumentORM.name == self.field_name, MetaDocumentORM.value.notin_(self.comparison_value))


class GtOperation(ComparisonOperation):
Expand All @@ -264,6 +308,9 @@ class GtOperation(ComparisonOperation):

def convert_to_elasticsearch(self):
return {"range": {self.field_name: {"gt": self.comparison_value}}}

def convert_to_sql(self):
return select([MetaDocumentORM.document_id]).where(MetaDocumentORM.name == self.field_name, MetaDocumentORM.value > self.comparison_value)


class GteOperation(ComparisonOperation):
Expand All @@ -273,6 +320,9 @@ class GteOperation(ComparisonOperation):

def convert_to_elasticsearch(self):
return {"range": {self.field_name: {"gte": self.comparison_value}}}

def convert_to_sql(self):
return select([MetaDocumentORM.document_id]).where(MetaDocumentORM.name == self.field_name, MetaDocumentORM.value >= self.comparison_value)


class LtOperation(ComparisonOperation):
Expand All @@ -282,6 +332,9 @@ class LtOperation(ComparisonOperation):

def convert_to_elasticsearch(self):
return {"range": {self.field_name: {"lt": self.comparison_value}}}

def convert_to_sql(self):
return select([MetaDocumentORM.document_id]).where(MetaDocumentORM.name == self.field_name, MetaDocumentORM.value < self.comparison_value)


class LteOperation(ComparisonOperation):
Expand All @@ -291,3 +344,6 @@ class LteOperation(ComparisonOperation):

def convert_to_elasticsearch(self):
return {"range": {self.field_name: {"lte": self.comparison_value}}}

def convert_to_sql(self):
return select([MetaDocumentORM.document_id]).where(MetaDocumentORM.name == self.field_name, MetaDocumentORM.value <= self.comparison_value)
11 changes: 5 additions & 6 deletions haystack/document_stores/sql.py
Original file line number Diff line number Diff line change
Expand Up @@ -105,6 +105,7 @@ class MetaLabelORM(ORMBase):
{},
) # type: ignore

from haystack.document_stores.filter_utils import LogicalFilterClause # Necessary to avoid circular import

class SQLDocumentStore(BaseDocumentStore):
def __init__(
Expand Down Expand Up @@ -294,12 +295,10 @@ def _query(
).filter_by(index=index)

if filters:
for key, values in filters.items():
documents_query = documents_query.join(MetaDocumentORM, aliased=True).filter(
MetaDocumentORM.name == key,
MetaDocumentORM.value.in_(values),
)

parsed_filter = LogicalFilterClause.parse(filters)
select_ids = parsed_filter.convert_to_sql()
documents_query = documents_query.filter(DocumentORM.id.in_(select_ids))

if only_documents_without_embedding:
documents_query = documents_query.filter(DocumentORM.vector_id.is_(None))
if vector_ids:
Expand Down
2 changes: 1 addition & 1 deletion test/test_document_store.py
Original file line number Diff line number Diff line change
Expand Up @@ -216,7 +216,7 @@ def test_get_all_documents_with_incorrect_filter_value(document_store_with_docs)
assert len(documents) == 0


@pytest.mark.parametrize("document_store_with_docs", ["elasticsearch"], indirect=True)
@pytest.mark.parametrize("document_store_with_docs", ["elasticsearch", "sql"], indirect=True)
Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

That's good. It's exactly what I meant in your other PR for the InMemoryDocumentStore. 👍

Copy link
Member

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Just make sure that there are no problems when merging this with Bogdan's changes in the same line of code.

Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Ok, I have pulled master manually to take care of that.

def test_extended_filter(document_store_with_docs):
# Test comparison operators individually
documents = document_store_with_docs.get_all_documents(filters={"meta_field": {"$eq": "test1"}})
Expand Down