Merge pull request #692 from deepmodeling/zjgemi

fix: vendor typeguard==2.13.3 fix: add unittest to github actions

.github/workflows/ci-test.yml

@@ -0,0 +1,21 @@
+name: Python unit-tests
+
+on:
+  - pull_request
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@master
+    - name: Set up Python 3.8
+      uses: actions/setup-python@master
+      with:
+        python-version: 3.8
+    - name: Install dependencies
+      run: |
+        pip install .
+        pip install pytest
+    - name: Test
+      run: DFLOW_MODE=debug pytest -vs tests

requirements.txt

@@ -2,7 +2,6 @@ six
 python-dateutil
 urllib3
 certifi
-typeguard==2.13.3
 argo-workflows==5.0.0
 jsonpickle
 minio

setup.py

@@ -21,6 +21,8 @@
     packages=[
         "dflow",
         "dflow/python",
+        "dflow/python/vendor",
+        "dflow/python/vendor/typeguard",
         "dflow/client",
         "dflow/plugins",
     ],
@@ -31,7 +33,6 @@
         "python-dateutil",
         "urllib3",
         "certifi",
-        "typeguard==2.13.3",
         "argo-workflows==5.0.0",
         "jsonpickle",
         "minio",

src/dflow/python/op.py

@@ -13,14 +13,13 @@
 from pathlib import Path
 from typing import Dict, List, Set, Union
 
-from typeguard import check_type
-
 from ..argo_objects import ArgoObjectDict
 from ..config import config
 from ..context_syntax import GLOBAL_CONTEXT
 from ..io import (InputArtifact, InputParameter, OutputArtifact,
                   OutputParameter, type_to_str)
 from ..utils import dict2list, get_key, randstr, s3_config
+from .vendor.typeguard import check_type
 from .opio import OPIO, Artifact, BigParameter, OPIOSign, Parameter
 
 iwd = os.getcwd()

src/dflow/python/python_op_template.py

@@ -5,7 +5,6 @@
 from typing import Any, Dict, List, Optional, Type, Union
 
 import jsonpickle
-import typeguard
 
 from .. import __path__
 from ..common import S3Artifact
@@ -338,7 +337,6 @@ def __init__(self,
         if upload_dflow:
             python_packages += __path__
             python_packages += jsonpickle.__path__
-            python_packages += typeguard.__path__
 
         self.python_packages = None
         if python_packages:
@@ -743,8 +741,7 @@ def convert_to_graph(self):
         del g["resource"]
         python_packages = []
         for p in self.python_packages:
-            if self.upload_dflow and Path(p).name in [
-                    "dflow", "jsonpickle", "typeguard"]:
+            if self.upload_dflow and Path(p).name in ["dflow", "jsonpickle"]:
                 continue
             python_packages.append(str(p))
         g["type"] = "PythonOPTemplate"