Add unit tests for reaction methods #11
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| name: testsuite | |
| on: | |
| push: | |
| pull_request: | |
| permissions: | |
| contents: read # to fetch code (actions/checkout) | |
| jobs: | |
| ubuntu: | |
| runs-on: ubuntu-latest | |
| env: | |
| FI_PROVIDER: "^psm3,psm3;ofi_rxd" | |
| OMPI_MCA_mtl_ofi_provider_exclude: psm3 | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@main | |
| - name: Validate CITATION.cff | |
| uses: dieghernan/cff-validator@v3 | |
| - name: Setup EESSI | |
| uses: eessi/github-action-eessi@v3 | |
| with: | |
| eessi_stack_version: "2023.06" | |
| - name: Install dependencies | |
| uses: ./.github/actions/dependencies | |
| with: | |
| modules: |- | |
| ESPResSo/4.2.1-foss-2023a | |
| extra-python-packages: |- | |
| pdoc==14.3 | |
| pylint==3.0.3 | |
| coverage==7.4.4 | |
| - name: Run testsuite | |
| run: | | |
| module restore pymbe | |
| source venv/bin/activate | |
| make pylint | |
| make unit_tests COVERAGE=1 | |
| make docs | |
| make coverage_xml | |
| shell: bash | |
| - name: Upload artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| path: "./documentation" | |
| name: documentation | |
| retention-days: 2 | |
| if-no-files-found: error | |
| - name: Upload coverage to Codecov | |
| if: ${{ github.repository == 'pyMBE-dev/pyMBE' }} | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| file: "./coverage.xml" | |
| disable_search: true | |
| env_vars: OS,PYTHON | |
| fail_ci_if_error: false | |
| flags: unittests | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| verbose: true |