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Merge pull request #107 from kabilar/main
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Update dependencies to reduce Docker image size for GitHub Codespaces
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tdincer authored Mar 9, 2023
2 parents 88aeb23 + 98fcbda commit a6fdf51
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Showing 5 changed files with 9 additions and 7 deletions.
1 change: 0 additions & 1 deletion .devcontainer/Dockerfile
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Expand Up @@ -6,7 +6,6 @@ RUN \
apt update && \
apt-get install bash-completion graphviz default-mysql-client s3fs procps -y && \
pip install --no-cache-dir --upgrade pip && \
pip install --no-cache-dir flake8 black pre-commit && \
# workflow dependencies
apt-get install gcc ffmpeg libsm6 libxext6 -y && \
# Commented out CaImAn installation due to Docker image size limits on Codespace
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9 changes: 7 additions & 2 deletions CHANGELOG.md
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Expand Up @@ -3,9 +3,13 @@
Observes [Semantic Versioning](https://semver.org/spec/v2.0.0.html) standard and
[Keep a Changelog](https://keepachangelog.com/en/1.0.0/) convention.

## [0.3.0] - 2023-08-03
## [0.3.1] - 2023-03-09

+ Add - Demo capabilities using GitHub CodeSpaces
+ Update - Simplify dependencies to reduce Docker image size for GitHub Codespaces

## [0.3.0] - 2023-03-08

+ Add - Demo capabilities using GitHub Codespaces

## [0.2.0] - 2022-10-14

Expand Down Expand Up @@ -50,6 +54,7 @@ Observes [Semantic Versioning](https://semver.org/spec/v2.0.0.html) standard and
+ Add - Containerization for pytests
+ Comment - Phase previously designated 0.1.0 -> 0.0.0

[0.3.1]: https://github.com/datajoint/workflow-calcium-imaging/releases/tag/0.3.1
[0.3.0]: https://github.com/datajoint/workflow-calcium-imaging/releases/tag/0.3.0
[0.2.0]: https://github.com/datajoint/workflow-calcium-imaging/releases/tag/0.2.0
[0.1.4]: https://github.com/datajoint/workflow-calcium-imaging/releases/tag/0.1.4
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1 change: 0 additions & 1 deletion requirements.txt
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Expand Up @@ -6,7 +6,6 @@ element-interface>=0.5.0
element-lab>=0.1.1
element-session>=0.1.2
ipykernel>=6.0.1
jupytext>=1.13.7
nd2
sbxreader @ git+https://github.com/datajoint/sbxreader
scanreader @ git+https://github.com/atlab/scanreader.git
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3 changes: 1 addition & 2 deletions requirements_dev.txt
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@@ -1,4 +1,3 @@
djarchive-client @ git+https://github.com/datajoint/djarchive-client.git
pytest
pytest-cov
shutils
shutils
2 changes: 1 addition & 1 deletion workflow_calcium_imaging/version.py
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Expand Up @@ -3,4 +3,4 @@
Update the Docker image tag in `docker-compose-test.yaml` and
`docker-compose-dev.yaml` to match
"""
__version__ = "0.3.0"
__version__ = "0.3.1"

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