Neuro NER Docker creator

This repository contains a Python application that creates a Flask server to serve a NeuroNER API. NeuroNER is a named entity recognition (NER) system that uses deep learning to identify entities in text. With this API, you can easily integrate NeuroNER into your applications.

Files

In the root folder create a folder named model and in here store your Neuro NER pickle and checkpoint files. the root directory should look like this.

• model

• parameters.ini
• dataset.pickle
• model.ckpt.data-0000-of-000001
• model.ckpt.index
• model.ckpt.meta

• PharmaCoNER-Tagger
• Dockerfile
• app.py

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Create Docker image

docker build -t <name_of_image> .

Run image

docker run  -p 8003:5000 -t <name_of_image>

Tag image to upload to github

docker tag <name_of_image>:latest <github_user>/<name_of_image>

Push to docker

docker push <github_user>/<name_of_image>:latest