Update dependencies w/ psa update -- dropping jose and other changes …

…are relevant, but I can strip this back if we don't want the minor bumps elsewhere?

lib/galaxy/dependencies/dev-requirements.txt

@@ -26,7 +26,7 @@ codespell==2.2.6 ; python_version >= "3.8" and python_version < "3.12"
 colorama==0.4.6 ; python_version >= "3.8" and python_version < "3.12" and (sys_platform == "win32" or platform_system == "Windows" or os_name == "nt")
 contourpy==1.1.1 ; python_version >= "3.8" and python_version < "3.12"
 coverage[toml]==7.3.2 ; python_version >= "3.8" and python_version < "3.12"
-cryptography==41.0.5 ; python_version >= "3.8" and python_version < "3.12"
+cryptography==41.0.7 ; python_version >= "3.8" and python_version < "3.12"
 cwltest==2.4.20231031143732 ; python_version >= "3.8" and python_version < "3.12"
 cycler==0.12.1 ; python_version >= "3.8" and python_version < "3.12"
 darker==1.7.2 ; python_version >= "3.8" and python_version < "3.12"

lib/galaxy/dependencies/pinned-requirements.txt

@@ -22,7 +22,7 @@ backports-zoneinfo==0.2.1 ; python_version >= "3.8" and python_version < "3.9"
 backports-zoneinfo[tzdata]==0.2.1 ; python_version >= "3.8" and python_version < "3.9"
 bagit-profile==1.3.1 ; python_version >= "3.8" and python_version < "3.12"
 bagit==1.8.1 ; python_version >= "3.8" and python_version < "3.12"
-bcrypt==4.0.1 ; python_version >= "3.8" and python_version < "3.12"
+bcrypt==4.1.1 ; python_version >= "3.8" and python_version < "3.12"
 bdbag==1.7.1 ; python_version >= "3.8" and python_version < "3.12"
 beaker==1.12.1 ; python_version >= "3.8" and python_version < "3.12"
 billiard==4.2.0 ; python_version >= "3.8" and python_version < "3.12"
@@ -48,7 +48,7 @@ cloudbridge==3.2.0 ; python_version >= "3.8" and python_version < "3.12"
 colorama==0.4.6 ; python_version >= "3.8" and python_version < "3.12" and platform_system == "Windows"
 coloredlogs==15.0.1 ; python_version >= "3.8" and python_version < "3.12"
 conda-package-streaming==0.9.0 ; python_version >= "3.8" and python_version < "3.12"
-cryptography==41.0.5 ; python_version >= "3.8" and python_version < "3.12"
+cryptography==41.0.7 ; python_version >= "3.8" and python_version < "3.12"
 cwl-upgrader==1.2.10 ; python_version >= "3.8" and python_version < "3.12"
 cwl-utils==0.31 ; python_version >= "3.8" and python_version < "3.12"
 cwltool==3.1.20231114134824 ; python_version >= "3.8" and python_version < "3.12"
@@ -60,7 +60,6 @@ dnspython==2.4.2 ; python_version >= "3.8" and python_version < "3.12"
 docopt==0.6.2 ; python_version >= "3.8" and python_version < "3.12"
 docutils==0.18.1 ; python_version >= "3.8" and python_version < "3.12"
 dparse==0.6.3 ; python_version >= "3.8" and python_version < "3.12"
-ecdsa==0.18.0 ; python_version >= "3.8" and python_version < "3.12"
 edam-ontology==1.25.2 ; python_version >= "3.8" and python_version < "3.12"
 email-validator==2.1.0.post1 ; python_version >= "3.8" and python_version < "3.12"
 exceptiongroup==1.2.0 ; python_version >= "3.8" and python_version < "3.11"
@@ -129,7 +128,6 @@ prompt-toolkit==3.0.41 ; python_version >= "3.8" and python_version < "3.12"
 prov==1.5.1 ; python_version >= "3.8" and python_version < "3.12"
 psutil==5.9.6 ; python_version >= "3.8" and python_version < "3.12"
 pulsar-galaxy-lib==0.15.5 ; python_version >= "3.8" and python_version < "3.12"
-pyasn1==0.5.1 ; python_version >= "3.8" and python_version < "3.12"
 pycparser==2.21 ; python_version >= "3.8" and python_version < "3.12"
 pycryptodome==3.19.0 ; python_version >= "3.8" and python_version < "3.12"
 pydantic-tes==0.1.5 ; python_version >= "3.8" and python_version < "3.12"
@@ -148,7 +146,6 @@ pyparsing==3.1.1 ; python_version >= "3.8" and python_version < "3.12"
 pyreadline3==3.4.1 ; sys_platform == "win32" and python_version >= "3.8" and python_version < "3.12"
 pysam==0.22.0 ; python_version >= "3.8" and python_version < "3.12"
 python-dateutil==2.8.2 ; python_version >= "3.8" and python_version < "3.12"
-python-jose==3.3.0 ; python_version >= "3.8" and python_version < "3.12"
 python-magic==0.4.27 ; python_version >= "3.8" and python_version < "3.12"
 python-multipart==0.0.6 ; python_version >= "3.8" and python_version < "3.12"
 python3-openid==3.2.0 ; python_version >= "3.8" and python_version < "3.12"
@@ -168,7 +165,6 @@ rich==13.7.0 ; python_version >= "3.8" and python_version < "3.12"
 rocrate==0.9.0 ; python_version >= "3.8" and python_version < "3.12"
 routes==2.5.1 ; python_version >= "3.8" and python_version < "3.12"
 rpds-py==0.13.1 ; python_version >= "3.8" and python_version < "3.12"
-rsa==4.9 ; python_version >= "3.8" and python_version < "3.12"
 ruamel-yaml-clib==0.2.8 ; platform_python_implementation == "CPython" and python_version < "3.12" and python_version >= "3.8"
 ruamel-yaml==0.18.5 ; python_version >= "3.8" and python_version < "3.12"
 s3fs==2023.10.0 ; python_version >= "3.8" and python_version < "3.12"
@@ -178,7 +174,7 @@ setuptools==69.0.2 ; python_version >= "3.8" and python_version < "3.12"
 shellescape==3.8.1 ; python_version >= "3.8" and python_version < "3.12"
 six==1.16.0 ; python_version >= "3.8" and python_version < "3.12"
 sniffio==1.3.0 ; python_version >= "3.8" and python_version < "3.12"
-social-auth-core[openidconnect]==4.0.3 ; python_version >= "3.8" and python_version < "3.12"
+social-auth-core[openidconnect]==4.5.0 ; python_version >= "3.8" and python_version < "3.12"
 sortedcontainers==2.4.0 ; python_version >= "3.8" and python_version < "3.12"
 sqlalchemy==1.4.50 ; python_version >= "3.8" and python_version < "3.12"
 sqlitedict==2.1.0 ; python_version >= "3.8" and python_version < "3.12"
@@ -192,7 +188,7 @@ tenacity==8.2.3 ; python_version >= "3.8" and python_version < "3.12"
 tifffile==2023.7.10 ; python_version >= "3.8" and python_version < "3.12"
 tinydb==4.8.0 ; python_version >= "3.8" and python_version < "3.12"
 tomli==2.0.1 ; python_version >= "3.8" and python_version < "3.11"
-tornado==6.3.3 ; python_version >= "3.8" and python_version < "3.12"
+tornado==6.4 ; python_version >= "3.8" and python_version < "3.12"
 tqdm==4.66.1 ; python_version >= "3.8" and python_version < "3.12"
 tuspy==1.0.1 ; python_version >= "3.8" and python_version < "3.12"
 tuswsgi==0.5.5 ; python_version >= "3.8" and python_version < "3.12"

lib/galaxy/dependencies/pinned-typecheck-requirements.txt

@@ -1,5 +1,5 @@
 cffi==1.16.0 ; python_version >= "3.8" and python_version < "3.12"
-cryptography==41.0.5 ; python_version >= "3.8" and python_version < "3.12"
+cryptography==41.0.7 ; python_version >= "3.8" and python_version < "3.12"
 mypy-extensions==1.0.0 ; python_version >= "3.8" and python_version < "3.12"
 mypy==1.7.1 ; python_version >= "3.8" and python_version < "3.12"
 pycparser==2.21 ; python_version >= "3.8" and python_version < "3.12"