implement FCN #35

	name: coverage

	on:
	push:
	branches:
	- 'master'
	paths:
	- 'src/**'
	- 'docker/**'
	- '.github/**'
	pull_request:
	branches:
	- '*'
	paths:
	- 'src/**'
	- 'docker/**'
	- '.github/**'

	jobs:
	consistency-test:
	name: build docker and run tests
	runs-on: ubuntu-latest

	continue-on-error: true

	steps:
	- name: Checkout
	uses: actions/checkout@v3
	with:
	fetch-depth: 0
	- name: Download test data
	run: \|
	pip install zenodo_get && \
	zenodo_get 7040177 -o /tmp/ && \
	7z x /tmp/venus_clouds_v1.0.7z -o/tmp/training_data && \
	rm /tmp/training_data/training_set_clouds_multiclass/s*
	- name: Build docker
	run: docker build docker/docker-cpu -t docker-cpu:1.0
	- name: pytest
	run: \|
	docker run --rm -v /tmp:/tmp:rw -v ${GITHUB_WORKSPACE}/src:/src:ro -e PYTHONPATH=/usr/local/lib/python3.6/dist-packages:/usr/local/lib/python3/dist-packages:/src --cpus=2 -m 20g docker-cpu:1.0 pytest --cov-report=term-missing:skip-covered --junitxml=/tmp/pytest.xml --cov=src --cov-config=src/test/.coveragerc src/test/consistency_test.py \| tee /tmp/pytest-coverage.txt
	- name: Pytest coverage comment
	uses: MishaKav/pytest-coverage-comment@main
	with:
	pytest-coverage-path: /tmp/pytest-coverage.txt
	junitxml-path: /tmp/pytest.xml

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