Merge pull request #203 from cmu-phil/algcomparison

Committing algcomparison stuff to this branch.
cmu-phil · Jun 13, 2016 · cc0adad · cc0adad
2 parents 3be3a51 + f4b097b
commit cc0adad
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Showing 54 changed files with 3,182 additions and 5 deletions.
diff --git a/causal-cmd/causal-cmd.iml b/causal-cmd/causal-cmd.iml
@@ -3,21 +3,18 @@
   <component name="NewModuleRootManager" LANGUAGE_LEVEL="JDK_1_7" inherit-compiler-output="false">
     <output url="file://$MODULE_DIR$/target/classes" />
     <output-test url="file://$MODULE_DIR$/target/test-classes" />
-    <exclude-output />
     <content url="file://$MODULE_DIR$">
       <sourceFolder url="file://$MODULE_DIR$/src/main/java" isTestSource="false" />
       <sourceFolder url="file://$MODULE_DIR$/src/main/resources" type="java-resource" />
       <sourceFolder url="file://$MODULE_DIR$/src/test/java" isTestSource="true" />
       <sourceFolder url="file://$MODULE_DIR$/src/test/resources" type="java-test-resource" />
       <sourceFolder url="file://$MODULE_DIR$/target/generated-sources/jaxb" isTestSource="false" generated="true" />
-      <excludeFolder url="file://$MODULE_DIR$/target/archive-tmp" />
+      <excludeFolder url="file://$MODULE_DIR$/target/classes" />
       <excludeFolder url="file://$MODULE_DIR$/target/dist" />
       <excludeFolder url="file://$MODULE_DIR$/target/jaxb2" />
-      <excludeFolder url="file://$MODULE_DIR$/target/maven-archiver" />
-      <excludeFolder url="file://$MODULE_DIR$/target/maven-status" />
-      <excludeFolder url="file://$MODULE_DIR$/target/site" />
       <excludeFolder url="file://$MODULE_DIR$/target/surefire" />
       <excludeFolder url="file://$MODULE_DIR$/target/surefire-reports" />
+      <excludeFolder url="file://$MODULE_DIR$/target/test-classes" />
     </content>
     <orderEntry type="inheritedJdk" />
     <orderEntry type="sourceFolder" forTests="false" />

diff --git a/tetrad-lib/src/main/java/edu/cmu/tetrad/algcomparison/Algorithm.java b/tetrad-lib/src/main/java/edu/cmu/tetrad/algcomparison/Algorithm.java
@@ -0,0 +1,17 @@
+package edu.cmu.tetrad.algcomparison;
+
+import edu.cmu.tetrad.data.DataSet;
+import edu.cmu.tetrad.graph.Graph;
+
+import java.util.Map;
+
+/**
+ * Created by jdramsey on 6/4/16.
+ */
+public interface Algorithm {
+    Graph search(DataSet dataSet, Map<String, Number> parameters);
+
+    Graph getComparisonGraph(Graph dag);
+
+    String getDescription();
+}