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* feat: prompt dataMC checks - wf: adding QCD workflow & modify triggered changes - scripts: improve fetch script with filenames only - plot: add validation plotter - doc/util/runner: add prompt_dataMC checks with dummy campaigns * fix: dtype * added scripts to run workflows * change ttsemilep to all plots * linting with black * fix: dump processed * feat: clean up MET * Add submit script instructions in README.md --------- Co-authored-by: uttiyasarkar <[email protected]>
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,135 @@ | ||
| name: QCD Workflow | ||
|
|
||
| on: | ||
| push: | ||
| branches: [ master ] | ||
| paths: | ||
| - 'src/BTVNanoCommissioning/workflows/*QCD*' | ||
| - 'src/BTVNanoCommissioning/helpers/update_branch.py' | ||
| - 'src/BTVNanoCommissioning/helpers/func.py' | ||
| - 'src/BTVNanoCommissioning/helpers/definitions.py' | ||
| - 'src/BTVNanoCommissioning/utils/*' | ||
| - '.github/workflows/QCD_workflow.yml' | ||
|
|
||
| pull_request_target: | ||
| branches: [ master ] | ||
| paths: | ||
| - 'src/BTVNanoCommissioning/workflows/*QCD*' | ||
| - 'src/BTVNanoCommissioning/helpers/update_branch.py' | ||
| - 'src/BTVNanoCommissioning/helpers/func.py' | ||
| - 'src/BTVNanoCommissioning/helpers/definitions.py' | ||
| - 'src/BTVNanoCommissioning/utils/*' | ||
| - '.github/workflows/QCD_workflow.yml' | ||
|
|
||
| workflow_dispatch: | ||
|
|
||
| jobs: | ||
| build: | ||
| runs-on: ubuntu-latest | ||
| if: ${{ !contains(github.event.head_commit.message, '[skip ci]') }} | ||
| strategy: | ||
| max-parallel: 4 | ||
| matrix: | ||
| python-version: ["3.10"] | ||
|
|
||
| defaults: | ||
| run: | ||
| shell: "bash -l {0}" | ||
|
|
||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - name: update submodules | ||
| env: | ||
| SSHKEY: ${{ secrets.GIT_CERN_SSH_PRIVATE }} | ||
| run: | | ||
| mkdir $HOME/.ssh | ||
| echo "$SSHKEY" > $HOME/.ssh/id_rsa | ||
| ls -lrt $HOME/.ssh | ||
| chmod 600 $HOME/.ssh/id_rsa | ||
| echo "HOST *" > ~/.ssh/config | ||
| echo "StrictHostKeyChecking no" >> ~/.ssh/config | ||
| git submodule update --init --recursive | ||
| - uses: cvmfs-contrib/github-action-cvmfs@v2 | ||
| with: | ||
| cvmfs_repositories: 'grid.cern.ch' | ||
|
|
||
| - name: Set conda environment | ||
| uses: conda-incubator/setup-miniconda@v2 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| miniforge-variant: Mambaforge | ||
| channels: conda-forge,defaults | ||
| channel-priority: true | ||
| activate-environment: btv_coffea | ||
| environment-file: test_env.yml | ||
| auto-activate-base: false | ||
|
|
||
| - name: Verify environment | ||
| run: | | ||
| conda info | ||
| conda env list | ||
| conda list | ||
| - name: Set up proxy | ||
| # https://awesome-workshop.github.io/gitlab-cms/03-vomsproxy/index.html | ||
| # continue-on-error: true | ||
| env: | ||
| # To genereate secrets use (strip all \n) | ||
| # base64 -i ~/.globus/usercert.pem | awk NF=NF RS= OFS= | ||
| # base64 -i ~/.globus/userkey.pem | awk NF=NF RS= OFS= | ||
| # Cross check roundtrip by adding ``| base64 -d `` and see if same as input | ||
| GRID_USERKEY: ${{ secrets.GRID_USERKEY }} | ||
| GRID_USERCERT: ${{ secrets.GRID_USERCERT }} | ||
| # Read automatically by voms-proxy-init | ||
| X509_VOMS_DIR: /cvmfs/grid.cern.ch/etc/grid-security/vomsdir/ | ||
| X509_VOMSES: /cvmfs/grid.cern.ch/etc/grid-security/vomses/ | ||
| X509_DEFAULT_USER_CERT: $HOME/.globus/usercert.pem | ||
| X509_DEFAULT_USER_KEY: $HOME/.globus/userkey.pem | ||
| run: | | ||
| mkdir $HOME/.globus | ||
| printf $GRID_USERKEY | base64 -d > $HOME/.globus/userkey.pem | ||
| printf $GRID_USERCERT | base64 -d > $HOME/.globus/usercert.pem | ||
| # DEBUG: dump decoded cert, cert is public, but don't dump key! | ||
| # base64 -i $HOME/.globus/usercert.pem | ||
| chmod 400 $HOME/.globus/userkey.pem | ||
| openssl rand -out $HOME/.rnd -hex 256 | ||
| printf "${{secrets.GRID_PASSWORD}}" | voms-proxy-init --voms cms --vomses ${X509_VOMSES} --debug --pwstdin | ||
| chmod 755 /usr/share/miniconda3/envs/btv_coffea/etc/grid-security/certificates | ||
| - name: Test xrootd | ||
| run: | | ||
| xrdcp root://eoscms.cern.ch//eos/cms/store/group/phys_btag/nano-commissioning/test_w_dj.root . | ||
| - name: Install Repo | ||
| run: | | ||
| pip install -e . | ||
|
|
||
| - name: QCD workflows with correctionlib | ||
| run: | | ||
| string=$(git log -1 --pretty=format:'%s') | ||
| if [[ $string == *"ci:skip array"* ]]; then | ||
| opts=$(echo "$opts" | sed 's/--isArray //g') | ||
| fi | ||
| if [[ $string == *"ci:skip syst"* ]]; then | ||
| opts=$(echo "$opts" | sed 's/--isSyst all//g') | ||
| elif [[ $string == *"ci:JERC_split"* ]]; then | ||
| opts=$(echo "$opts" | sed 's/--isSyst all/--isSyst JERC_split/g') | ||
| elif [[ $string == *"ci:weight_only"* ]]; then | ||
| opts=$(echo "$opts" | sed 's/--isSyst all/--isSyst weight_only/g') | ||
| fi | ||
| python runner.py --workflow QCD_sf --json metadata/test_bta_run3.json --executor iterative $opts | ||
| # - name: QCD mu workflows with correctionlib | ||
| # run: | | ||
| # message=$(git log -1 --pretty=format:'%s') | ||
| # if [[ $string == *"ci:skip array"* ]]; then | ||
| # opts=$(echo "$opts" | sed 's/--isArray //g') | ||
| # fi | ||
| # if [[ $string == *"ci:skip syst"* ]]; then | ||
| # opts=$(echo "$opts" | sed 's/--isSyst all//g') | ||
| # elif [[ $string == *"ci:JERC_split"* ]]; then | ||
| # opts=$(echo "$opts" | sed 's/--isSyst all/--isSyst JERC_split/g') | ||
| # elif [[ $string == *"ci:weight_only"* ]]; then | ||
| # opts=$(echo "$opts" | sed 's/--isSyst all/--isSyst weight_only/g') | ||
| # fi | ||
| # python runner.py --workflow QCD_mu --json metadata/test_bta_run3.json --executor iterative --overwrite $opts |
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