Update stable-apptainer.yaml

cmkobel · Feb 3, 2025 · a5095f7 · a5095f7
1 parent d882503
commit a5095f7
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/.github/workflows/stable-apptainer.yaml b/.github/workflows/stable-apptainer.yaml
@@ -68,7 +68,7 @@ jobs:
       - name: full
         run: |
           unzip tests/E._faecium/fna.zip 
-          comparem2 --config input_genomes="*.fna" --omit-from antismash
+          comparem2 --config input_genomes="*.fna" --omit-from antismash_download
           
           tree results_comparem2
           rm -rf .snakemake results_comparem2 *.fna
@@ -105,4 +105,4 @@ jobs:
 # Runner can be started from thylakoid@johans:
 # sudo -u ci-runner bash
 # cd /mnt/evo/actions-runner/
-# ./run.sh
+# ./run.sh