Iteration #250
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1 error and 4 warnings
Run conda-incubator/setup-miniconda@v2
The process '/usr/share/miniconda/condabin/conda' failed with exit code 1
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ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Run conda-incubator/setup-miniconda@v2
/usr/share/miniconda/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Run conda-incubator/setup-miniconda@v2
/usr/share/miniconda/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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Run conda-incubator/setup-miniconda@v2
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> [240 lines of output]
Using numpy 2.2.1
export FFLAGS='-O3 -fopenmp -m64 -march=native -fPIC -Wno-maybe-uninitialized -Wno-unused-function -Wno-cpp'
export LDFLAGS='-lgomp -lpthread -lm -ldl -L/usr/lib/ -lblas -llapack'
export FCC='gfortran'
src/qmllib/representations /usr/share/miniconda/envs/rmsd-dev/bin/python -m numpy.f2py -c frepresentations.f90 -m frepresentations --backend meson
Traceback (most recent call last):
File "<frozen runpy>", line 198, in _run_module_as_main
File "<frozen runpy>", line 88, in _run_code
File "/tmp/pip-build-env-jcyjle33/overlay/lib/python3.11/site-packages/numpy/f2py/__main__.py", line 5, in <module>
main()
File "/tmp/pip-build-env-jcyjle33/overlay/lib/python3.11/site-packages/numpy/f2py/f2py2e.py", line 781, in main
run_compile()
File "/tmp/pip-build-env-jcyjle33/overlay/lib/python3.11/site-packages/numpy/f2py/f2py2e.py", line 753, in run_compile
builder.compile()
File "/tmp/pip-build-env-jcyjle33/overlay/lib/python3.11/site-packages/numpy/f2py/_backends/_meson.py", line 192, in compile
self.run_meson(self.build_dir)
File "/tmp/pip-build-env-jcyjle33/overlay/lib/python3.11/site-packages/numpy/f2py/_backends/_meson.py", line 185, in run_meson
self._run_subprocess_command(setup_command, build_dir)
File "/tmp/pip-build-env-jcyjle33/overlay/lib/python3.11/site-packages/numpy/f2py/_backends/_meson.py", line 181, in _run_subprocess_command
subprocess.run(command, cwd=cwd, check=True)
File "/usr/share/miniconda/envs/rmsd-dev/lib/python3.11/subprocess.py", line 571, in run
raise CalledProcessError(retcode, process.args,
subprocess.CalledProcessError: Command '['meson', 'setup', 'bbdir']' returned non-zero exit status 1.
The Meson build system
Version: 1.6.1
Source dir: /tmp/tmprepcmzxw
Build dir: /tmp/tmprepcmzxw/bbdir
Build type: native build
Project name: frepresentations
Project version: 0.1
meson.build:1:0: ERROR: Compiler gfortran cannot compile programs.
A full log can be found at /tmp/tmprepcmzxw/bbdir/meson-logs/meson-log.txt
::group::==== CI platform detected, click here for meson-log.txt contents. ====
Build started at 2025-01-03T09:12:43.728575
Main binary: /usr/share/miniconda/envs/rmsd-dev/bin/python
Build Options:
Python system: Linux
The Meson build system
Version: 1.6.1
Source dir: /tmp/tmprepcmzxw
Build dir: /tmp/tmprepcmzxw/bbdir
Build type: native build
Project name: frepresentations
Project version: 0.1
-----------
Detecting compiler via: `gfortran --help` -> 0
stdout:
Usage: gfortran [options] file...
Options:
-pass-exit-codes Exit with highest error code from a phase.
--help Display this information.
--target-help Display target specific command line options (including assembler and linker options).
--help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...].
Display specific types of command line options.
(Use '-v --help' to display command line options of sub-processes).
--version Display compiler version information.
-dumpspecs Display all of the built in spec strings.
-dumpversion Display the version of the compiler.
-dumpmachine Display the compiler's target processor.
-foffload=<targets> Specify offloading targets.
-print-search-dirs Display the directories in the compiler's search path.
-print-libgcc-file-name Display the name of the compiler's companion library.
-print-file-name=<lib> Display the full path to li
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