chore: Ignore pycache files in .gitignore #55
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name: build | |
on: | |
push: | |
paths-ignore: | |
- "README.md" | |
- "docs/**" | |
pull_request: | |
paths-ignore: | |
- "README.md" | |
- "docs/*" | |
jobs: | |
build_cpu: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: [3.9, "3.10", "3.11"] | |
#torch: [1.12.0, 1.13.0, 2.0.0] | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v3 | |
# Setup environment (conda, dependencies, etc.) | |
- name: Setup miniconda | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
miniforge-variant: Mambaforge | |
channels: "conda-forge, pytorch" | |
python-version: ${{ matrix['python-version'] }} | |
use-mamba: true | |
#- name: Install PyTorch | |
# run: mamba install -c pytorch pytorch==${{matrix.torch}} cpuonly | |
- name: Install Extras | |
run: pip install -r requirements.txt | |
# - name: Install OpenBabel | |
# run: mamba install -c conda-forge openbabel | |
# - name: Install reduce | |
# run: mamba install -c speleo3 reduce | |
# Install coverage tool | |
- name: Install Coverage | |
run: pip install coverage | |
# Run tests with coverage | |
- name: Run unit tests and generate coverage report | |
run: | | |
coverage run --source=posecheck -m unittest discover -s tests -p "test_*.py" | |
coverage xml | |
# # Upload coverage to Codecov | |
# - name: Upload coverage to Codecov | |
# uses: codecov/codecov-action@v2 | |
# with: | |
# files: ./coverage.xml | |
# fail_ci_if_error: true | |
# token: ${{ secrets.CODECOV_TOKEN }} # not required for public repos |