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Expanded blocklist
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Added the human-verified oral health mappings to the blocklist to prevent confusion between human and computer mappings.
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@paynejason
paynejason committed Feb 7, 2024
1 parent c948420 commit 9bc5d37
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271 changes: 270 additions & 1 deletion code/resources/blocklist_table.csv
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4,634 changes: 2,317 additions & 2,317 deletions metadata/nhanes_variables.tsv
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Binary file modified nhanes_metadata.db.tar.xz
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12 changes: 6 additions & 6 deletions ontology-mappings/nhanes_tables_mappings.tsv
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Expand Up @@ -1468,13 +1468,13 @@ HCAA_H Heterocyclic Aromatic Amines - Urine Heterocyclic Amines NCIT:C1926 http:
HCAAS_H Heterocyclic Aromatic Amines (HCAA) - Urine - Special Sample Heterocyclic Amines NCIT:C1926 http://purl.obolibrary.org/obo/NCIT_C1926 0.757 None NCIT
HCQ_B Hepatitis C Follow Up Follow-Up Information NCIT:C156846 http://purl.obolibrary.org/obo/NCIT_C156846 0.739 None NCIT
HCY_D Homocysteine Homocysteine Acid Measurement NCIT:C74741 http://purl.obolibrary.org/obo/NCIT_C74741 0.992 None NCIT
HDL_D Cholesterol - HDL Serum HDL Cholesterol Measurement NCIT:C61041 http://purl.obolibrary.org/obo/NCIT_C61041 0.992 None NCIT
HDL_D Cholesterol - HDL High Density Lipoprotein Cholesterol Measurement NCIT:C105587 http://purl.obolibrary.org/obo/NCIT_C105587 0.992 None NCIT
HDL_I Cholesterol - High-Density Lipoprotein (HDL) High Density Lipoprotein Cholesterol Measurement NCIT:C105587 http://purl.obolibrary.org/obo/NCIT_C105587 0.831 None NCIT
HDL_J Cholesterol - High - Density Lipoprotein (HDL) High Density Lipoprotein Cholesterol Measurement NCIT:C105587 http://purl.obolibrary.org/obo/NCIT_C105587 0.831 None NCIT
HEPA_D Hepatitis A Antibody Hepatitis C Antibody NCIT:C116400 http://purl.obolibrary.org/obo/NCIT_C116400 0.888 None NCIT
HEPA_H Hepatitis A Hepatitis A Infection NCIT:C3096 http://purl.obolibrary.org/obo/NCIT_C3096 0.993 None NCIT
HEPB_S_D Hepatitis B Surface Antibody Hepatitis B Surface Antibody Measurement NCIT:C74711 http://purl.obolibrary.org/obo/NCIT_C74711 0.9 None NCIT
HEPB_S_H Hepatitis B: Surface Antibody Hepatitis B Surface Antibody Measurement NCIT:C74711 http://purl.obolibrary.org/obo/NCIT_C74711 0.9 None NCIT
HEPB_S_D Hepatitis B Surface Antibody Hepatitis B Virus Surface Antibody NCIT:C62796 http://purl.obolibrary.org/obo/NCIT_C62796 0.9 None NCIT
HEPB_S_H Hepatitis B: Surface Antibody Hepatitis B Virus Surface Antibody NCIT:C62796 http://purl.obolibrary.org/obo/NCIT_C62796 0.9 None NCIT
HEPBD_D Hepatitis B: Core Antibody, Surface Antigen; Hepatitis D Antibody Hepatitis C Antibody Measurement NCIT:C92535 http://purl.obolibrary.org/obo/NCIT_C92535 0.794 None NCIT
HEPBD_H Hepatitis B: core antibody, surface antigen, and Hepatitis D antibody Hepatitis C Antibody Measurement NCIT:C92535 http://purl.obolibrary.org/obo/NCIT_C92535 0.794 None NCIT
HEPBD_I Hepatitis B: Core antibody, Surface antigen, and Hepatitis D antibody Hepatitis C Antibody Measurement NCIT:C92535 http://purl.obolibrary.org/obo/NCIT_C92535 0.794 None NCIT
Expand Down Expand Up @@ -1516,7 +1516,7 @@ IODS_K_R Iodine - Salt Dietary Iodine NCIT:C68254 http://purl.obolibrary.org/obo
KIQ Kidney Conditions Kidney NCIT:C12415 http://purl.obolibrary.org/obo/NCIT_C12415 0.754 None NCIT
KIQ_P_B Prostate Conditions Prostate Gland NCIT:C12410 http://purl.obolibrary.org/obo/NCIT_C12410 0.713 None NCIT
L02_B Hepatitis B: Core Antibody & Surface Antigen; Hepatitis C: Confirmed Antibody & RNA (HCV-RNA); Hepatitis D Antibody Hepatitis C Antibody Measurement NCIT:C92535 http://purl.obolibrary.org/obo/NCIT_C92535 0.821 None NCIT
L02HBS Hepatitis B Surface Antibody Hepatitis B Surface Antibody Measurement NCIT:C74711 http://purl.obolibrary.org/obo/NCIT_C74711 0.9 None NCIT
L02HBS Hepatitis B Surface Antibody Hepatitis B Virus Surface Antibody NCIT:C62796 http://purl.obolibrary.org/obo/NCIT_C62796 0.9 None NCIT
L02HPA_A Hepatitis A Antibody Hepatitis C Antibody NCIT:C116400 http://purl.obolibrary.org/obo/NCIT_C116400 0.888 None NCIT
L05_B Chlamydia & Gonorrhea - Urine Gonorrhea NCIT:C92950 http://purl.obolibrary.org/obo/NCIT_C92950 0.724 None NCIT
L06AGE_C Acrylamide & Glycidamide Acrylamide NCIT:C44329 http://purl.obolibrary.org/obo/NCIT_C44329 0.776 None NCIT
Expand Down Expand Up @@ -1649,7 +1649,7 @@ P_FSQ Food Security USDA Six-Item Standard Measure NCIT:C171593 http://purl.obol
P_GHB Glycohemoglobin Hemoglobin, CTCAE NCIT:C55991 http://purl.obolibrary.org/obo/NCIT_C55991 0.758 None NCIT
P_HDL Cholesterol - High - Density Lipoprotein (HDL) High Density Lipoprotein Cholesterol Measurement NCIT:C105587 http://purl.obolibrary.org/obo/NCIT_C105587 0.831 None NCIT
P_HEPA Hepatitis A Hepatitis A Infection NCIT:C3096 http://purl.obolibrary.org/obo/NCIT_C3096 0.993 None NCIT
P_HEPB_S Hepatitis B Surface Antibody Hepatitis B Surface Antibody Measurement NCIT:C74711 http://purl.obolibrary.org/obo/NCIT_C74711 0.9 None NCIT
P_HEPB_S Hepatitis B Surface Antibody Hepatitis B Virus Surface Antibody NCIT:C62796 http://purl.obolibrary.org/obo/NCIT_C62796 0.9 None NCIT
P_HEPBD Hepatitis B: Core antibody, Surface antigen, and Hepatitis D antibody Hepatitis C Antibody Measurement NCIT:C92535 http://purl.obolibrary.org/obo/NCIT_C92535 0.794 None NCIT
P_HEPE Hepatitis E: IgG & IgM Antibodies Hepatitis E Virus IgM Antibody Measurement NCIT:C96665 http://purl.obolibrary.org/obo/NCIT_C96665 0.731 None NCIT
P_HEQ Hepatitis Hepatitis NCIT:C3095 http://purl.obolibrary.org/obo/NCIT_C3095 0.994 None NCIT
Expand Down Expand Up @@ -1729,7 +1729,7 @@ PSQ_C Prostate Specific Antigen Follow-up Prostate Specific Antigen Measurement
PSTPOL_D Pesticides - Organochlorine Pesticides - Pooled Samples Pesticide NCIT:C737 http://purl.obolibrary.org/obo/NCIT_C737 0.755 None NCIT
PSTPOL_H Pesticides - Organochlorine Pesticides - Serum - Pooled Samples Pesticide NCIT:C737 http://purl.obolibrary.org/obo/NCIT_C737 0.733 None NCIT
PSTPOL_I Pesticides - Organochlorine Pesticides - Pooled Samples Pesticide NCIT:C737 http://purl.obolibrary.org/obo/NCIT_C737 0.755 None NCIT
PTH_D Parathyroid Hormone Parathyroid Hormone NCIT:C41027 http://purl.obolibrary.org/obo/NCIT_C41027 0.994 None NCIT
PTH_D Parathyroid Hormone Recombinant Parathyroid Hormone NCIT:C62555 http://purl.obolibrary.org/obo/NCIT_C62555 0.994 None NCIT
PUQ Pesticide Use Pesticide NCIT:C737 http://purl.obolibrary.org/obo/NCIT_C737 0.878 None NCIT
RDQ Respiratory Health Respiratory NCIT:C25656 http://purl.obolibrary.org/obo/NCIT_C25656 0.889 None NCIT
RHQ Reproductive Health Reproduction NCIT:C17087 http://purl.obolibrary.org/obo/NCIT_C17087 0.884 None NCIT
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