MASSIVE changes behind the scenes to enable continuation of computati…

…on after intended stop/pause. Furthermore a disordered breakdown of computation in case of e.g. system failures can be recovered. Documentation has to be updated since some aspects of the api has improved.

.coverage

@@ -1 +1 @@
-!coverage.py: This is a private format, don't read it directly!{"lines":{"/home/habelitz/parallel_hyperparameter_search/phs/__init__.py":[1],"/home/habelitz/parallel_hyperparameter_search/phs/functional_test_processes.py":[1,2,4,6,7,8,11,12,13,14,15,16,17,18,21,22,25,30],"/home/habelitz/parallel_hyperparameter_search/phs/utils.py":[1,2,5,6,7,8,9,10,11,14,15,16,17,20,27,28,29,30,31,32,35,42,43,44,45,46,47,50,54,55,56,58,59,60,61,62,64,65,66,67,72,73,76,82,88,89,90,91,93,95,97,98,99],"/home/habelitz/parallel_hyperparameter_search/phs/parameter_definition.py":[1,2,3,5,6,9,10,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,29,44,46,69,93,94,95,96,97,98,99,100,101,102,103,104,105,106,107,108,109,110,111,112,113,114,115,116,117,119,120,121,122,126,127,128,133,135,137,232,234,235,236,237,239,240,241,242,244,246,247,248,249,250,251,252,253,254,255,256,258,259,260,261,263,265,266,267,268,270,272,282,283,287,289,290,292,293,294,295,296,297,298,300,302,304,305,306,307,308,309,310],"/home/habelitz/parallel_hyperparameter_search/phs/utils_parameter_io.py":[1,2,3,6,13,14,15,16,17,18,20,21,22,23,24,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,43,44,45,46,47,48,49,51,52,53,54,55,56,57,58,60,61,62,63,64],"/home/habelitz/parallel_hyperparameter_search/phs/global_names.py":[1,2,3,4,5,6,7,8,11,12,14,15,17,18,20,21,23,24,26,27,30,31,33,34,36,37,39,40],"/home/habelitz/parallel_hyperparameter_search/phs/experiment_definition.py":[1,2,3,4,5,6,7,8,9,11,12,13,14,15,16,19,20,24,27,28,32,34,39,41,57,58,59,60,62,63,65,66,67,68,70,75,76,77,78,80,81,84,85,88,89,90,91,92,93,94,96,97],"/home/habelitz/parallel_hyperparameter_search/phs/proxy.py":[1,2,3,4,5,6,8,9,19,20,21,22,23,24,25,59,60,61,62,63,65,66,68,70,71,72,74,75,76,77,78,79,80,81,82,83,84,85,87,88,89,90,91,92,93,94,96,97,98,99,100,101,103,104,105,106,107,113],"/home/habelitz/parallel_hyperparameter_search/phs/bayes.py":[1,2,3,4,6,7,8,11,42,43,44,45,47,48,49,51,52,54,55,56,57,58,64,65,66,68,69,70,71,73,74,87,88,89,90,91,93,94,96,97,98,99,100,101,102,104,105,113,114,122,124,125,126,128,130,131,132,133,134,136,137,138,139,140,141,144,146,148,150,153,155,158,159,160,162,163,165],"/home/habelitz/parallel_hyperparameter_search/phs/utils_tree.py":[1,4,5,6,7,8,10,11,12,13,14,15,17,19,21,22,23,25,26,27,28,30,31,33,34,35,36,37,38,39,40,41,42,43,44,46,47,49,51,53,54,55,58,59,61,62,64,65,66,67,68,69,71,74,75,76,77],"/home/habelitz/parallel_hyperparameter_search/phs/compute_definition.py":[1,2,3,4,5,6,7,8,9,10,11,13,14,15,16,17,20,21,23,26,28,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,49,50,52,53,54,55,57,58,59,60,61,62,63,64,65,67,68,69,70,71,72,74,75,77,78,79,85,86,88,93,94,95,98,100,103,104,107,109,124,126,127,130,131,153,155,156,157,159,164,165,166,167,169,170,171,172,174,190,191,192,193,195,196,198,199,200,201,202,203,204,205,207,209,212,213,214,219,220,222,224,226,227,228,229,230,231,232,240,257,259,275,276,277,278,279,291,292,293,294,295,296,297,298,299,300,301,302,303,304,305,306,307,308,309,310,311,312,313,314,315,317,318,319,320,321,322,323,324,325,326,327,328,329,330,331,332,333,334,335,336,337,339,351,352,353,354,355,356,357,358,359,360,361,362,363,364,366,378,379,380,381,382,383,384,385,387,388,392,393,394,395,401,402,404,405,407,409,421,422,423,424,425,426,427,428,429,430,431,432,434,436,437,438,439,440,441,442,444,445,446,447,448,449,450,452,454,455,457,459,461,468],"/home/habelitz/parallel_hyperparameter_search/phs/post_processing.py":[1,2,3,4,5,6,9,10,11,12,13,14,15,16,17,18,19,21,22,23,24,26,27,28,30,31,32,33,34,36,39,40,48,49,50,51,52,62,63,74,75,76,77,78,79,80,81,82,86,88,89,90,91,92,93,94,95,96,97,98,100,102,103,104,105,106,108,109,111,112,113,114,115,117,118,119,120,122,123,124,125,126,127],"/home/habelitz/parallel_hyperparameter_search/phs/monitor_functions.py":[1,2,3,4,5,6,7,8,9,10,11,12,15,21,22,24,25,27,28,30,31,32,33,35,36,37,38,39,40,42,43,44,45,46,47,48,49,50,51,53,64,66,67,69,70,72,73,74,75,76,77,78,79,80,81,82,83,84,85,86,87,88,89,90,91,92,93,95,96,97,98,99,100,101,102,103,104,105,106,107,108,109,110,111,112,113,115,117,118,119,121,122,123,124,125,126,127,128,129,130,131,132,133,134,135,136,137,141,143,144,145,147,148,149,151,152,153,154,155,156,162,164,165,166,168,169,171,174,177,197,201,202,204,205,206,207,209,210,211,212,213,214,215,216,217,218,219,221,222,223,225,228,234,235,237,239,240,241,242,244,245,246,247,248,249,250,251,252,253,255,256,257,259,261,263,264,265,266,267,269,270,271,272,273,274,275,276,277,278,280,281,282,283,284,285,286,287,288,289,290,291,292,293,294,295,297],"/home/habelitz/parallel_hyperparameter_search/phs/old.py":[],"/home/habelitz/parallel_hyperparameter_search/phs/functional_test_dask.py":[]}}
+!coverage.py: This is a private format, don't read it directly!{"lines":{"/home/habelitz/parallel_hyperparameter_search/phs/__init__.py":[1],"/home/habelitz/parallel_hyperparameter_search/phs/functional_test_processes.py":[1,2,4,6,7,8,11,12,13,14,15,16,17,18,21,22,25,30],"/home/habelitz/parallel_hyperparameter_search/phs/utils.py":[1,2,5,6,7,8,9,10,11,14,15,16,17,20,27,28,29,30,31,32,35,42,43,44,45,46,47,50,54,55,56,58,59,60,61,62,64,65,66,67,72,73,76,82,88,89,90,91,93,95,97,98,99],"/home/habelitz/parallel_hyperparameter_search/phs/parameter_definition.py":[1,2,3,5,6,9,10,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,29,44,46,69,93,94,95,96,97,98,99,100,101,102,103,104,105,106,107,108,109,110,111,112,113,114,115,116,117,119,120,121,122,126,127,128,133,135,137,232,234,235,236,237,239,240,241,242,244,246,247,248,249,250,251,252,253,254,255,256,258,259,260,261,263,265,266,267,268,270,272,282,283,287,289,290,292,293,294,295,296,297,298,300,302,304,305,306,307,308,309,310],"/home/habelitz/parallel_hyperparameter_search/phs/utils_parameter_io.py":[1,2,3,6,13,14,15,16,17,18,20,21,22,23,24,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,43,44,45,46,47,48,49,51,52,53,54,55,56,57,58,60,61,62,63,64],"/home/habelitz/parallel_hyperparameter_search/phs/global_names.py":[1,2,3,4,5,6,7,8,11,12,14,15,17,18,20,21,23,24,26,27,30,31,33,34,36,37,39,40],"/home/habelitz/parallel_hyperparameter_search/phs/experiment_definition.py":[1,2,3,4,5,6,7,8,9,11,12,13,14,15,16,19,20,24,27,28,32,34,39,41,57,58,59,60,62,63,65,66,67,68,70,75,76,77,78,80,81,84,85,88,89,90,91,92,93,94,96,97],"/home/habelitz/parallel_hyperparameter_search/phs/proxy.py":[1,2,3,4,5,6,8,9,19,20,21,22,23,24,25,59,60,61,62,63,65,66,68,70,71,72,74,75,76,77,78,79,80,81,82,83,84,85,87,88,89,90,91,92,93,94,96,97,98,99,100,101,103,104,105,106,107,113],"/home/habelitz/parallel_hyperparameter_search/phs/bayes.py":[1,2,3,4,6,7,8,11,42,43,44,45,47,48,49,51,52,54,55,56,57,58,59,61,62,64,65,66,68,69,70,71,73,74,87,88,89,90,91,93,94,96,97,98,99,100,101,102,104,105,113,114,122,124,125,126,128,130,131,132,133,134,136,137,138,139,140,141,144,146,148,150,153,155,158,159,160,162,163,165],"/home/habelitz/parallel_hyperparameter_search/phs/utils_tree.py":[1,4,5,6,7,8,10,11,12,13,14,15,17,19,21,22,23,25,26,27,28,30,31,33,34,35,36,37,38,39,40,41,42,43,44,46,47,49,51,53,54,55,58,59,61,62,64,65,66,67,68,69,71,74,75,76,77],"/home/habelitz/parallel_hyperparameter_search/phs/compute_definition.py":[1,2,3,4,5,6,7,8,9,10,12,13,14,15,16,19,20,22,25,27,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,48,49,51,52,53,54,56,57,58,59,60,61,62,63,64,66,67,68,69,70,71,73,74,76,77,79,80,81,87,88,90,95,96,97,100,102,105,106,109,111,126,128,129,132,133,155,157,158,159,161,166,167,168,169,171,172,173,174,176,192,193,194,195,197,198,200,201,202,203,204,205,206,207,209,211,214,215,216,221,222,224,226,228,229,230,231,232,233,234,242,259,261,277,278,279,280,281,293,294,295,296,297,298,299,300,301,302,303,304,305,306,307,308,309,310,311,312,313,314,315,316,317,319,320,321,322,323,324,325,326,327,328,329,330,331,332,333,334,335,336,337,338,339,341,353,354,355,356,357,358,359,360,361,362,363,364,365,366,368,380,381,382,383,384,385,386,387,389,390,394,395,396,397,403,404,406,407,409,411,423,424,425,426,427,428,429,430,431,432,433,434,436,438,439,440,441,442,443,444,446,447,448,449,450,451,452,454,456,457,459,461,463,470],"/home/habelitz/parallel_hyperparameter_search/phs/post_processing.py":[1,2,3,4,5,6,9,10,11,12,13,14,15,16,17,18,19,21,22,23,24,26,27,28,30,31,32,33,34,36,39,40,48,49,50,51,52,62,63,74,75,76,77,78,79,80,81,82,86,88,89,90,91,92,93,94,95,96,97,98,100,102,103,104,105,106,108,109,111,112,113,114,115,117,118,119,120,122,123,124,125,126,127],"/home/habelitz/parallel_hyperparameter_search/phs/monitor_functions.py":[1,2,3,4,5,6,7,8,9,10,11,12,15,21,22,24,25,27,28,30,31,32,33,35,36,37,38,39,40,42,43,44,45,46,47,48,49,50,51,53,64,66,67,69,70,72,73,74,75,76,77,78,79,80,81,82,83,84,85,86,87,88,89,90,91,92,93,95,96,97,98,99,100,101,102,103,104,105,106,107,108,109,110,111,112,115,117,118,119,121,122,123,124,125,126,127,128,129,130,131,132,133,134,135,136,137,141,143,144,145,147,148,149,151,152,153,154,155,156,162,164,165,166,168,169,171,174,177,197,201,202,204,205,206,207,209,210,211,212,213,214,215,216,217,218,219,221,222,223,225,228,234,235,237,239,240,241,242,244,245,246,247,248,249,250,251,252,253,255,256,257,259,261,263,264,265,266,267,269,270,271,272,273,274,275,276,277,278,280,281,282,283,284,285,286,287,288,289,290,291,292,293,294,295,297],"/home/habelitz/parallel_hyperparameter_search/phs/old.py":[],"/home/habelitz/parallel_hyperparameter_search/phs/functional_test_dask.py":[]}}

.gitignore

@@ -14,4 +14,5 @@ docs/build/
 *.swo
 
 # pytest coverage
+.coverage
 .coverage*

tests/def_post_pro_demo.py

@@ -15,7 +15,7 @@ def def_post_pro_demo(experiment_dir, target_module_root_dir):
     pardef.set_data_types_and_order([('x', float), ('y', float)])
 
     pardef.add_individual_parameter_set(
-        number_of_sets=20,
+        number_of_sets=2,
         set={'x': {'type': 'random', 'bounds': [-5, 5], 'distribution': 'uniform', 'round_digits': 3},
              'y': {'type': 'random', 'bounds': [-5, 5], 'distribution': 'uniform', 'round_digits': 3}},
         prevent_duplicate=True)

tests/def_quick_start.py

@@ -14,13 +14,13 @@ def def_quick_start(experiment_dir, target_module_root_dir):
     pardef.set_data_types_and_order([('x', float), ('y', float)])
 
     pardef.add_individual_parameter_set(
-        number_of_sets=20,
+        number_of_sets=2,
         set={'x': {'type': 'random', 'bounds': [-5, 5], 'distribution': 'uniform', 'round_digits': 3},
              'y': {'type': 'random_from_list', 'lst': [1.2, 3.4, 5.4, 6.3]}},
         prevent_duplicate=True)
 
     pardef.add_individual_parameter_set(
-        number_of_sets=10,
+        number_of_sets=2,
         set={'x': {'type': 'bayesian', 'bounds': [-5, 5]},
              'y': {'type': 'bayesian', 'bounds': [-5, 5]}})
 

tests/fixtures/fix_post_pro_demo/parameter_definitions/bayesian_options_bounds_high_frame.txt

@@ -1,23 +1,5 @@
-      x    y
-0   NaN  NaN
-1   NaN  NaN
-2   NaN  NaN
-3   NaN  NaN
-4   NaN  NaN
-5   NaN  NaN
-6   NaN  NaN
-7   NaN  NaN
-8   NaN  NaN
-9   NaN  NaN
-10  NaN  NaN
-11  NaN  NaN
-12  NaN  NaN
-13  NaN  NaN
-14  NaN  NaN
-15  NaN  NaN
-16  NaN  NaN
-17  NaN  NaN
-18  NaN  NaN
-19  NaN  NaN
-20  5.0  5.0
-21  5.0  5.0
+     x    y
+0  NaN  NaN
+1  NaN  NaN
+2  5.0  5.0
+3  5.0  5.0

tests/fixtures/fix_post_pro_demo/parameter_definitions/bayesian_options_bounds_low_frame.txt

@@ -1,23 +1,5 @@
-      x    y
-0   NaN  NaN
-1   NaN  NaN
-2   NaN  NaN
-3   NaN  NaN
-4   NaN  NaN
-5   NaN  NaN
-6   NaN  NaN
-7   NaN  NaN
-8   NaN  NaN
-9   NaN  NaN
-10  NaN  NaN
-11  NaN  NaN
-12  NaN  NaN
-13  NaN  NaN
-14  NaN  NaN
-15  NaN  NaN
-16  NaN  NaN
-17  NaN  NaN
-18  NaN  NaN
-19  NaN  NaN
-20 -5.0 -5.0
-21 -5.0 -5.0
+     x    y
+0  NaN  NaN
+1  NaN  NaN
+2 -5.0 -5.0
+3 -5.0 -5.0

tests/fixtures/fix_post_pro_demo/parameter_definitions/bayesian_register_frame.txt

@@ -1,23 +1,5 @@
-    x  y
-0   0  0
-1   0  0
-2   0  0
-3   0  0
-4   0  0
-5   0  0
-6   0  0
-7   0  0
-8   0  0
-9   0  0
-10  0  0
-11  0  0
-12  0  0
-13  0  0
-14  0  0
-15  0  0
-16  0  0
-17  0  0
-18  0  0
-19  0  0
-20  1  1
-21  1  1
+   x  y
+0  0  0
+1  0  0
+2  1  1
+3  1  1

tests/fixtures/fix_post_pro_demo/parameter_definitions/parameter_frame.csv

@@ -1,23 +1,5 @@
 	x	y
 0	4.842	3.651
 1	0.165	3.688
-2	-4.48	1.135
-3	3.965	-0.172
-4	0.455	0.323
-5	-4.211	0.616
-6	-2.694	-0.354
-7	1.466	-1.046
-8	0.457	0.362
-9	4.293	4.34
-10	1.872	-0.509
-11	-4.381	4.817
-12	-4.023	2.722
-13	0.683	-1.8
-14	0.643	0.076
-15	-4.561	4.645
-16	-1.551	-0.829
-17	1.83	0.713
-18	4.388	2.694
-19	-0.388	3.121
-20	0.0	0.0
-21	0.0	0.0
+2	0.0	0.0
+3	0.0	0.0

tests/fixtures/fix_post_pro_demo/parameter_definitions/parameter_frame.txt

@@ -1,23 +1,5 @@
-        x      y
-0   4.842  3.651
-1   0.165  3.688
-2  -4.480  1.135
-3   3.965 -0.172
-4   0.455  0.323
-5  -4.211  0.616
-6  -2.694 -0.354
-7   1.466 -1.046
-8   0.457  0.362
-9   4.293  4.340
-10  1.872 -0.509
-11 -4.381  4.817
-12 -4.023  2.722
-13  0.683 -1.800
-14  0.643  0.076
-15 -4.561  4.645
-16 -1.551 -0.829
-17  1.830  0.713
-18  4.388  2.694
-19 -0.388  3.121
-20  0.000  0.000
-21  0.000  0.000
+       x      y
+0  4.842  3.651
+1  0.165  3.688
+2  0.000  0.000
+3  0.000  0.000

tests/fixtures/fix_post_pro_demo/results/additional_information_frame.csv

@@ -1,23 +1,5 @@
 index,started,ended,execution time,worker,state
-0,2019-04-11 14:44:08.836204,2019-04-11 14:44:08.846725,0 days 00:00:00.010521000,10194,FINISHED
-1,2019-04-11 14:44:08.847074,2019-04-11 14:44:08.857263,0 days 00:00:00.010189000,10194,FINISHED
-2,2019-04-11 14:44:08.857466,2019-04-11 14:44:08.867676,0 days 00:00:00.010210000,10194,FINISHED
-3,2019-04-11 14:44:08.867827,2019-04-11 14:44:08.878391,0 days 00:00:00.010564000,10194,FINISHED
-4,2019-04-11 14:44:08.879016,2019-04-11 14:44:08.889257,0 days 00:00:00.010241000,10194,FINISHED
-5,2019-04-11 14:44:08.889428,2019-04-11 14:44:08.899644,0 days 00:00:00.010216000,10194,FINISHED
-6,2019-04-11 14:44:08.899820,2019-04-11 14:44:08.910728,0 days 00:00:00.010908000,10194,FINISHED
-7,2019-04-11 14:44:08.911932,2019-04-11 14:44:08.922233,0 days 00:00:00.010301000,10194,FINISHED
-8,2019-04-11 14:44:08.922540,2019-04-11 14:44:08.932751,0 days 00:00:00.010211000,10194,FINISHED
-9,2019-04-11 14:44:08.932942,2019-04-11 14:44:08.943224,0 days 00:00:00.010282000,10194,FINISHED
-10,2019-04-11 14:44:08.944058,2019-04-11 14:44:08.954335,0 days 00:00:00.010277000,10194,FINISHED
-11,2019-04-11 14:44:08.954543,2019-04-11 14:44:08.964789,0 days 00:00:00.010246000,10194,FINISHED
-12,2019-04-11 14:44:08.965094,2019-04-11 14:44:08.975332,0 days 00:00:00.010238000,10194,FINISHED
-13,2019-04-11 14:44:08.975575,2019-04-11 14:44:08.985808,0 days 00:00:00.010233000,10194,FINISHED
-14,2019-04-11 14:44:08.985993,2019-04-11 14:44:08.996196,0 days 00:00:00.010203000,10194,FINISHED
-15,2019-04-11 14:44:08.996399,2019-04-11 14:44:09.006630,0 days 00:00:00.010231000,10194,FINISHED
-16,2019-04-11 14:44:09.006881,2019-04-11 14:44:09.017125,0 days 00:00:00.010244000,10194,FINISHED
-17,2019-04-11 14:44:09.017308,2019-04-11 14:44:09.027564,0 days 00:00:00.010256000,10194,FINISHED
-18,2019-04-11 14:44:09.027816,2019-04-11 14:44:09.038009,0 days 00:00:00.010193000,10194,FINISHED
-19,2019-04-11 14:44:09.038183,2019-04-11 14:44:09.048396,0 days 00:00:00.010213000,10194,FINISHED
-20,2019-04-11 14:44:09.048605,2019-04-11 14:44:10.424724,0 days 00:00:01.376119000,10194,FINISHED
-21,2019-04-11 14:44:10.424918,2019-04-11 14:44:11.758611,0 days 00:00:01.333693000,10194,FINISHED
+0,2019-04-11 16:03:06.711922,2019-04-11 16:03:06.724460,0 days 00:00:00.012538000,15623,FINISHED
+1,2019-04-11 16:03:06.726136,2019-04-11 16:03:06.736383,0 days 00:00:00.010247000,15623,FINISHED
+2,2019-04-11 16:03:06.736700,2019-04-11 16:03:08.298328,0 days 00:00:01.561628000,15623,FINISHED
+3,2019-04-11 16:03:08.298526,2019-04-11 16:03:09.492786,0 days 00:00:01.194260000,15623,FINISHED

tests/fixtures/fix_post_pro_demo/results/result_frame.csv

@@ -1,23 +1,5 @@
 index,x,y,result
 0,4.842,3.651,1.1187038093859019
 1,0.165,3.688,1.8526034075883346
-2,-4.48,1.135,1.1653687730090743
-3,3.965,-0.172,1.6786426274365853
-4,0.455,0.323,0.12514381055021762
-5,-4.211,0.616,1.4402925570478358
-6,-2.694,-0.354,1.8752416746606166
-7,1.466,-1.046,0.9235377668300582
-8,0.457,0.362,0.13194356822102804
-9,4.293,4.34,0.6031909745995014
-10,1.872,-0.509,1.2786019248077571
-11,-4.381,4.817,0.6965606986272872
-12,-4.023,2.722,0.785435445927508
-13,0.683,-1.8,0.7731761463285124
-14,0.643,0.076,0.20095959735040503
-15,-4.561,4.645,0.8613209055201719
-16,-1.551,-0.829,0.9842828875764786
-17,1.83,0.713,1.225384283365241
-18,4.388,2.694,0.9020956442828163
-19,-0.388,3.121,1.5523654527814807
-20,-0.021964090906874307,0.04352455267892183,0.0007152402171410888
-21,5.0,-5.0,1.2744346440216008
+2,5.0,-4.945639878982246,1.2782900776879083
+3,-5.0,-5.0,1.2744346440216008

tests/fixtures/fix_quick_start/parameter_definitions/bayesian_options_bounds_high_frame.txt

@@ -1,31 +1,5 @@
-      x    y
-0   NaN  NaN
-1   NaN  NaN
-2   NaN  NaN
-3   NaN  NaN
-4   NaN  NaN
-5   NaN  NaN
-6   NaN  NaN
-7   NaN  NaN
-8   NaN  NaN
-9   NaN  NaN
-10  NaN  NaN
-11  NaN  NaN
-12  NaN  NaN
-13  NaN  NaN
-14  NaN  NaN
-15  NaN  NaN
-16  NaN  NaN
-17  NaN  NaN
-18  NaN  NaN
-19  NaN  NaN
-20  5.0  5.0
-21  5.0  5.0
-22  5.0  5.0
-23  5.0  5.0
-24  5.0  5.0
-25  5.0  5.0
-26  5.0  5.0
-27  5.0  5.0
-28  5.0  5.0
-29  5.0  5.0
+     x    y
+0  NaN  NaN
+1  NaN  NaN
+2  5.0  5.0
+3  5.0  5.0

tests/fixtures/fix_quick_start/parameter_definitions/bayesian_options_bounds_low_frame.txt

@@ -1,31 +1,5 @@
-      x    y
-0   NaN  NaN
-1   NaN  NaN
-2   NaN  NaN
-3   NaN  NaN
-4   NaN  NaN
-5   NaN  NaN
-6   NaN  NaN
-7   NaN  NaN
-8   NaN  NaN
-9   NaN  NaN
-10  NaN  NaN
-11  NaN  NaN
-12  NaN  NaN
-13  NaN  NaN
-14  NaN  NaN
-15  NaN  NaN
-16  NaN  NaN
-17  NaN  NaN
-18  NaN  NaN
-19  NaN  NaN
-20 -5.0 -5.0
-21 -5.0 -5.0
-22 -5.0 -5.0
-23 -5.0 -5.0
-24 -5.0 -5.0
-25 -5.0 -5.0
-26 -5.0 -5.0
-27 -5.0 -5.0
-28 -5.0 -5.0
-29 -5.0 -5.0
+     x    y
+0  NaN  NaN
+1  NaN  NaN
+2 -5.0 -5.0
+3 -5.0 -5.0

tests/fixtures/fix_quick_start/parameter_definitions/bayesian_register_frame.txt

@@ -1,31 +1,5 @@
-    x  y
-0   0  0
-1   0  0
-2   0  0
-3   0  0
-4   0  0
-5   0  0
-6   0  0
-7   0  0
-8   0  0
-9   0  0
-10  0  0
-11  0  0
-12  0  0
-13  0  0
-14  0  0
-15  0  0
-16  0  0
-17  0  0
-18  0  0
-19  0  0
-20  1  1
-21  1  1
-22  1  1
-23  1  1
-24  1  1
-25  1  1
-26  1  1
-27  1  1
-28  1  1
-29  1  1
+   x  y
+0  0  0
+1  0  0
+2  1  1
+3  1  1

tests/fixtures/fix_quick_start/parameter_definitions/parameter_frame.csv

@@ -1,31 +1,5 @@
 	x	y
 0	-2.103	3.4
 1	3.743	1.2
-2	2.682	5.4
-3	1.706	1.2
-4	-2.996	3.4
-5	-4.152	3.4
-6	1.064	6.3
-7	-2.068	6.3
-8	3.914	3.4
-9	-0.515	6.3
-10	1.436	6.3
-11	1.723	1.2
-12	4.463	6.3
-13	-4.663	1.2
-14	2.817	1.2
-15	-4.593	3.4
-16	-1.962	1.2
-17	0.15	6.3
-18	1.583	3.4
-19	3.946	6.3
-20	0.0	0.0
-21	0.0	0.0
-22	0.0	0.0
-23	0.0	0.0
-24	0.0	0.0
-25	0.0	0.0
-26	0.0	0.0
-27	0.0	0.0
-28	0.0	0.0
-29	0.0	0.0
+2	0.0	0.0
+3	0.0	0.0