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R scripts, data and latex script used for the article: FAST INFERENCE OF INDIVIDUAL ADMIXTURE COEFFICIENTS USING GEOGRAPHIC DATA.

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cayek/TESS3Article

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TESS3 article scripts

R scripts, data and latex script used for the TESS3 article. Experiments presented in this paper can be reproduced with the script present in this repository.

How to run R scripts

Each figure subdirectory contain the following subdirectory.

Experiments

You can build experiments with this command line:

make experiments

However, running these scripts can be long. Script outputs are provided in RData files.

Figures

You can build article figures with this command line:

make figures

Rmarkdown

You can build rmarkdowns documents with this command line:

make rmarkdowns

How to compile the article

The latex sources of the article can be compiled using this command:

make article

Docker image

We provide a docker image which embed the software environment used for this project. Thus every build command can be run in the docker container. You can run a the container shell with this command lines:

make docker_run
make docker_shell

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R scripts, data and latex script used for the article: FAST INFERENCE OF INDIVIDUAL ADMIXTURE COEFFICIENTS USING GEOGRAPHIC DATA.

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