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exercise solution note
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andrewGhazi committed Oct 11, 2024
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Expand Up @@ -682,7 +682,7 @@ sce <- read10xCounts(file.path(dirname(local_path), "raw_feature_bc_matrix/"))

::: solution

The first few lines here read the data from ExperimentHub and the mitochondrial genes are identified by gene symbols in the row data. Otherwise the steps are the same:
After getting the data, the steps are largely copy-pasted from above. For the sake of simplicity the mitochondrial genes are identified by gene symbols in the row data. Otherwise the steps are the same:

```{r eval = FALSE}
e.out <- emptyDrops(counts(sce))
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