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STY: Sync with template files
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josephmje authored Mar 19, 2021
2 parents 77da8cb + 0c46148 commit 1adf8ee
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2 changes: 1 addition & 1 deletion AUTHORS
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Michael Joseph
Jerrold Jeyachandra
Erin Dickie
Ariel Rokem
Ariel Rokem
4 changes: 2 additions & 2 deletions CITATION
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Please cite as:

Michael Joseph, Jerrold Jeyachandra, and Erin Dickie (eds):
"Data Carpentry: Introduction to." Version 2019.11, November 2019,
https://github.com/conp-pcno-training/SDC-BIDS-IntroMRI
"Data Carpentry: Introduction to MRI Data Analysis." Version 2019.11, November 2019,
https://github.com/carpentries-incubator/SDC-BIDS-IntroMRI
4 changes: 2 additions & 2 deletions index.md
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Expand Up @@ -12,7 +12,7 @@ The lesson will introduce different types of MRI modalities and how they can be
Over the past decade, the neuroimaging field has produced (and continues to produce) incredible amounts of data about the brain. As a result, the scientific community has developed a diverse set of tools to facilitate the access, analysis and visualization of this data. This lesson will start you on a path towards using these tools effectively in your own work.

> ## Prerequisites
>
>
> This lesson assumes that you have some working knowledge of the Unix shell and Python.
> These requirements can be fulfilled by:
> - completing the Software Carpentry [Unix][swc-shell] and/or [Python][swc-python] lessons
Expand All @@ -28,4 +28,4 @@ To get started, follow the directions on the [Setup][lesson-setup] page to insta
[swc-python]: https://swcarpentry.github.io/python-novice-inflammation
[swc-shell]: https://swcarpentry.github.io/shell-novice
[inc-fmri]: https://carpentries-incubator.github.io/SDC-BIDS-fMRI
[inc-dmri]: https://carpentries-incubator.github.io/SDC-BIDS-dMRI
[inc-dmri]: https://carpentries-incubator.github.io/SDC-BIDS-dMRI
6 changes: 3 additions & 3 deletions setup.md
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Expand Up @@ -87,12 +87,12 @@ If you installed Anaconda, you can launch a notebook in two ways:
> It might ask you if you'd like to send anonymized usage information to Anaconda developers:
> ![Anaconda Navigator first launch](fig/anaconda-navigator-first-launch.png)
> Make your choice and click "Ok, and don't show again" button.
>
>
> 2. Find the "Notebook" tab and click on the "Launch" button:
> ![Anaconda Navigator Notebook launch](fig/anaconda-navigator-notebook-launch.png)
> Anaconda will open a new browser window or tab with a Notebook Dashboard showing you the
> contents of your Home (or User) folder.
>
>
> 3. Navigate to the `data` directory by clicking on the directory names leading to it:
> `Desktop`, `dc-mri`, then `data`:
> ![Anaconda Navigator Notebook directory](fig/jupyter-notebook-data-directory.png)
Expand Down Expand Up @@ -186,4 +186,4 @@ winpty python
[ds000030]: https://openneuro.org/datasets/ds000030/versions/1.0.0
[gitbash]: https://gitforwindows.org
{% include links.md %}
{% include links.md %}

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