update quarto template

.github/workflows/publish_site.yml

@@ -20,10 +20,11 @@ jobs:
       - name: Set up Quarto
         uses: quarto-dev/quarto-actions/setup@v2
         with:
-          version: 1.2.112
+          version: 1.3.450
 
       - name: Render Site
-        uses: quarto-dev/quarto-actions/render@v2
+        run: |
+          quarto render
 
       - name: No Jekyll
         run: |

_extensions/cambiotraining/courseformat/_extension.yml

@@ -1,6 +1,6 @@
 title: Course Page Format
 author: Cambridge Informatics Training
-version: 1.0.5
+version: 1.0.6
 contributes:
   formats:
     html:
@@ -11,4 +11,6 @@ contributes:
       code-link: true
       code-copy: true
   shortcodes:
-    - star_levels.lua
+    - star_levels.lua
+  filters:
+    - callout_exercise.lua

_extensions/cambiotraining/courseformat/callout_exercise.lua

@@ -0,0 +1,45 @@
+function Div(div)
+  -- process exercise
+  if div.classes:includes("callout-exercise") then
+    -- default title
+    local title = "Exercise"
+    -- Use first element of div as title if this is a header
+    if div.content[1] ~= nil and div.content[1].t == "Header" then
+      title = pandoc.utils.stringify(div.content[1])
+      div.content:remove(1)
+    end
+    -- return a callout instead of the Div
+    return quarto.Callout({
+      type = "exercise",
+      content = { pandoc.Div(div) },
+      title = title,
+      collapse = false
+    })
+  end
+
+  -- process answer
+  if div.classes:includes("callout-answer") then
+    -- default title
+    local title = "Answer"
+    -- return a callout instead of the Div
+    return quarto.Callout({
+      type = "answer",
+      content = { pandoc.Div(div) },
+      title = title,
+      collapse = true
+    })
+  end
+
+  -- process hint
+  if div.classes:includes("callout-hint") then
+    -- default title
+    local title = "Hint"
+    -- return a callout instead of the Div
+    return quarto.Callout({
+      type = "hint",
+      content = { pandoc.Div(div) },
+      title = title,
+      collapse = true
+    })
+  end
+end

_quarto.yml

@@ -15,6 +15,9 @@ project:
 
 format: courseformat-html
 
+filters:
+  - courseformat
+
 execute:
   freeze: auto
 
@@ -41,7 +44,7 @@ book:
     logo: "_extensions/cambiotraining/courseformat/img/university_crest_reversed.png"
     right:
       - icon: github
-        href: https://github.com/cambiotraining/
+        href: https://github.com/cambiotraining/bacterial-genomics
         aria-label: Bioinformatics Training Facility GitHub
       - icon: twitter
         href: https://twitter.com/bioinfocambs