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MSK internal: mapping from dataline to impact cohorts #506

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inodb opened this issue May 23, 2023 · 0 comments

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inodb commented May 23, 2023

We have some logic here to do sample mappings from Darwin/CIS:

https://github.com/cBioPortal/cbioportal/blob/master/web/src/main/java/org/cbioportal/web/MskEntityTranslationController.java

If we want to use this for dataline we would need:

A way to map from Patient ID rather than Sample ID
Do an entire cohort rather than one sample/patient at a time

For now we went with this solution: cBioPortal/cbioportal-frontend#4616

JREastonMarks transferred this issue from cBioPortal/cbioportal

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