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Feature/mutated genes total profiled counts and gene panels #10824
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haynescd
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demo-rfc80-poc
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feature/mutated-genes-total-profiled-counts
Jun 12, 2024
Merged
Feature/mutated genes total profiled counts and gene panels #10824
haynescd
merged 13 commits into
demo-rfc80-poc
from
feature/mutated-genes-total-profiled-counts
Jun 12, 2024
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alisman
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src/main/resources/org/cbioportal/persistence/mybatisclickhouse/StudyViewMapper.xml
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* Add Support for TotalProfiledCase Counts for Mutated-genes endpoint. * Create sql files to create new tables * Add unit test for totalProfiledCount * Add matching gene panel ids * Add TotalProfiledCountsWithoutPanelData * Add profileCount for genes without gene panel data * Add Comments for SQL * Update matching Gene Panel Ids * Clean up code * Fix test * Add query to get correct Gene Panels * Fix unit test * Add comments
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Add Total Profiled counts and matching Gene Panel ids for mutated genes