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rollback gene panel mapper changes from profiling counts fix (#11292) #2559

rollback gene panel mapper changes from profiling counts fix (#11292)

rollback gene panel mapper changes from profiling counts fix (#11292) #2559

Workflow file for this run

name: Docker Image CI
on:
push:
branches:
- master
- release-*
- rc
- rfc*
- demo-*
- fusion-sv-migration
- redis-branch-up-to-date
tags: '*'
jobs:
build_and_publish_web_and_data:
if: github.repository == 'cBioPortal/cbioportal'
runs-on: ubuntu-latest
steps:
- name: Checkout git repo
uses: actions/checkout@v3
- name: 'Create application.properties'
run: |
cp src/main/resources/application.properties.EXAMPLE src/main/resources/application.properties
- name: Extract metadata
id: meta
uses: docker/metadata-action@v4
with:
images: |
cbioportal/cbioportal
# The latest tag will also be generated on tag event with a valid semver tag
tags: |
type=ref,event=branch
type=semver,pattern={{version}}
- name: Login to DockerHub
uses: docker/login-action@v3
with:
username: ${{ secrets.DOCKER_USERNAME }}
password: ${{ secrets.DOCKER_PASSWORD }}
# The following two actions are required to build multi-platform images
# buildx is an extension of docker build, QUEM is used to convert the binary to varies architecture
- name: Set up QEMU
uses: docker/setup-qemu-action@v3
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
- name: Publish Docker Image on Tag
uses: docker/build-push-action@v3
with:
context: .
push: true
tags: ${{ steps.meta.outputs.tags }}
platforms: linux/amd64,linux/arm64
file: docker/web-and-data/Dockerfile
cache-from: type=gha
cache-to: type=gha
build_and_publish_web:
if: github.repository == 'cBioPortal/cbioportal'
runs-on: ubuntu-latest
steps:
- name: Checkout git repo
uses: actions/checkout@v3
- name: 'Create application.properties'
run: |
cp src/main/resources/application.properties.EXAMPLE src/main/resources/application.properties
- name: Extract metadata
id: meta
uses: docker/metadata-action@v4
with:
images: |
cbioportal/cbioportal
# Do not generate latest tag
flavor: |
latest=false
suffix=-web-shenandoah
tags: |
type=ref,event=branch
type=semver,pattern={{version}}
- name: Login to DockerHub
uses: docker/login-action@v3
with:
username: ${{ secrets.DOCKER_USERNAME }}
password: ${{ secrets.DOCKER_PASSWORD }}
# The following two actions are required to build multi-platform images
# buildx is an extension of docker build, QUEM is used to convert the binary to varies architecture
- name: Set up QEMU
uses: docker/setup-qemu-action@v3
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
- name: Publish Docker Image on Tag
uses: docker/build-push-action@v3
with:
context: .
push: true
tags: ${{ steps.meta.outputs.tags }}
platforms: linux/amd64,linux/arm64
file: docker/web/Dockerfile
cache-from: type=gha
cache-to: type=gha