Add mutations table and fisher exact two-sided p value to comparison lollipop#4556

Merged

alisman merged 21 commits intocBioPortal:masterfrom gblaih:group-comparison-lollipop-plot-mutations-table

Jul 7, 2023

+2,907-298

Commits on Jul 7, 2023

add mutations table and fisher exact p value
Bryan Lai
committed
fix pvge mutation table count header and adjust badge selector height
Bryan Lai
committed
added co-occurrence patern, p value, q value, enriched in columns and dropdown, shift click message. specified fisher test use in text
Bryan Lai
committed
fix mutations not filtering by selected transcript
Bryan Lai
committed
fix transcript and text bugs, add significant only checkbox, fisher label displays numbers used, changes to layout
Bryan Lai
committed
use merge mutations to set table data
Bryan Lai
committed
addressed comments and feedback from review
Bryan Lai
committed
refactoring and addressing comments from second review
Bryan Lai
committed
fix fisher label, results view lollipop tooltip and y axis label, comparison filter alert and table
Bryan Lai
committed
fix typo in alteration overlap
Bryan Lai
committed
fix reset filter bug
Bryan Lai
committed
fix oncokb annotation actionability handling, overlap tooltip text and table header styling
Bryan Lai
committed
change fisher test to use two-sided throughout
Bryan Lai
committed
change tests to use two-sided fisher test
Bryan Lai
committed
fix patient view mutation table annotations not loading
Bryan Lai
committed
update screenshots
Bryan Lai
committed
sort by p-value
Bryan Lai
committed
remove numbers from fisher label
Bryan Lai
committed
address review comments
Bryan Lai
committed
add column formatter and fisher two sided unit tests
Bryan Lai
committed
add e2e and screenshot tests for comparison mutations table
Bryan Lai
committed

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Add mutations table and fisher exact two-sided p value to comparison lollipop#4556

Commits on Jul 7, 2023

add mutations table and fisher exact p value

fix pvge mutation table count header and adjust badge selector height

added co-occurrence patern, p value, q value, enriched in columns and dropdown, shift click message. specified fisher test use in text

fix mutations not filtering by selected transcript

fix transcript and text bugs, add significant only checkbox, fisher label displays numbers used, changes to layout

use merge mutations to set table data

addressed comments and feedback from review

refactoring and addressing comments from second review

fix fisher label, results view lollipop tooltip and y axis label, comparison filter alert and table

fix typo in alteration overlap

fix reset filter bug

fix oncokb annotation actionability handling, overlap tooltip text and table header styling

change fisher test to use two-sided throughout

change tests to use two-sided fisher test

fix patient view mutation table annotations not loading

update screenshots

sort by p-value

remove numbers from fisher label

address review comments

add column formatter and fisher two sided unit tests

add e2e and screenshot tests for comparison mutations table