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Feature/bug fixes #1

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justinjj24 wants to merge 3 commits into develop from feature/bug-fixes

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justinjj24 commented Jul 31, 2023 •

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Fix download genetic map git repo file path
Fix prepare_ref_panel_1KGP.sh #Normalization and filtering
- bcftools view arg '-V' -> '-v' to select snp,indel insead of exclude
Minor prepare_ref_panel_1KGP.sh fix mkdir with -p
Added GLIMPSE2_chunk into dockerfile
Added utils to dockerfile
Modified import utils in GLIMPSE_phase.py

justinjj24 added 3 commits

July 31, 2023 02:30


          added utils and GLIMPSE2_chunk

27f9f73


          update import utils

e693b08


          minor fix on gmap path, bcftools and mkdir

6c3cbb8

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