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expected cells as integer
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rsc3 committed Feb 3, 2025
1 parent 1023faa commit 09adf51
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2 changes: 1 addition & 1 deletion pipelines/skylab/atac/atac.wdl
Original file line number Diff line number Diff line change
Expand Up @@ -559,7 +559,7 @@ task CreateFragmentFile {
atac_gtf = "~{annotations_gtf}"
preindex = "~{preindex}"
atac_nhash_id = "~{atac_nhash_id}"
expected_cells = "~{atac_expected_cells}"
expected_cells = ~{atac_expected_cells}
# calculate chrom size dictionary based on text file
chrom_size_dict={}
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