Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

expose numberOfNegativeControls in illumina_demux #498

Merged
merged 1 commit into from
Nov 17, 2023

Conversation

tomkinsc
Copy link
Member

In the event demux is run with a samplesheet containing only one sample row, find_uncertain_barcodes() will fail since it assumes at least one NTC is present in the samplesheet. The changes in this commit allow the user to set this param to zero, which should allow outlier detection to succeed.

In the event demux is run with a samplesheet containing only one sample row, find_uncertain_barcodes() will fail since it assumes at least one NTC is present in the samplesheet. The changes in this commit allow the user to set this param to zero, which should allow outlier detection to succeed.
@tomkinsc tomkinsc merged commit 94ae9d5 into master Nov 17, 2023
12 checks passed
@tomkinsc tomkinsc deleted the ct-demux-expose-ntc-num-for-outlier-id branch November 17, 2023 16:03
golu099 pushed a commit that referenced this pull request Dec 8, 2023
In the event demux is run with a samplesheet containing only one sample row, find_uncertain_barcodes() will fail since it assumes at least one NTC is present in the samplesheet. The changes in this commit allow the user to set this param to zero, which should allow outlier detection to succeed.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant