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tweaks to demux_only and demux_metag #464

Merged
merged 1 commit into from
Apr 14, 2023
Merged

tweaks to demux_only and demux_metag #464

merged 1 commit into from
Apr 14, 2023

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dpark01
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@dpark01 dpark01 commented Apr 14, 2023

Two tweaks to demux workflows to harmonize with others:

  • demux_metag -- this WiP was mostly complete but for now this PR will comment out all the blastx components on contigs until we figure out how to do this more efficiently/deterministically/cost-effectively
  • demux_only -- add workflow-level output variables copied from task outputs to mirror what demux_deplete has been emitting (in particular, run metadata extracted from the flowcell and sample/library metadata encoded in json structures)

@dpark01 dpark01 merged commit 8646865 into master Apr 14, 2023
@dpark01 dpark01 deleted the dp-demux branch April 14, 2023 13:33
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