parameterize and update defaults for VM shapes in nextstrain tasks #455
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dpark01
changed the title
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These default shape parameters passed on Terra on Azure recently w/latest ncov/open data set |
cjllanwarne
reviewed
Mar 7, 2023
kraefrei
suggested changes
Mar 7, 2023
Co-authored-by: Christian Freitas <[email protected]>
Co-authored-by: Christian Freitas <[email protected]>
Co-authored-by: Christian Freitas <[email protected]>
Co-authored-by: Christian Freitas <[email protected]>
Co-authored-by: Christian Freitas <[email protected]>
Co-authored-by: Christian Freitas <[email protected]>
Co-authored-by: Christian Freitas <[email protected]>
Co-authored-by: Christian Freitas <[email protected]>
Co-authored-by: Christian Freitas <[email protected]>
Co-authored-by: Christian Freitas <[email protected]>
Co-authored-by: Christian Freitas <[email protected]>
kraefrei
approved these changes
Mar 7, 2023
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Update default disk sizes in various nextstrain tasks need to increase to handle the size of ncov/open data. Parameterize most of these values so they can be overridden at runtime by users. Reduce default CPU for mafft (from 96 to 64) to make it easier to run in various clouds. Mostly inspired by some Terra-on-Azure testing.