sarscov2_nextstrain and sarscov2_lineages improvements #208
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dpark01
commented
Feb 8, 2021
dpark01
commented
- sarscov2_nextstrain: pull more defaults from ncov github repo (clades, auspice config, ref genome and annot) if not otherwise specified
- sarscov2_nextstrain: add tip_frequencies outputs
- sarscov2_lineages: bump pangolin/pangolearn docker image
… tip frequencies to augur from msa
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