sudo chmod

broadinstitute · Nov 30, 2023 · a7e4ebd · a7e4ebd
1 parent bea6b04
commit a7e4ebd
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/pipes/WDL/tasks/tasks_megablast.wdl b/pipes/WDL/tasks/tasks_megablast.wdl
@@ -36,7 +36,7 @@ task trim_rmdup_subsamp {
     }
     command <<<
         set -ex o pipefail
-        cat> ~{outBam} | chmod u+x ~{outBam}
+        cat> ~{outBam} | sudo chmod u+x ~{outBam}
         assembly.py --version | tee VERSION
         #BAM ->FASTQ-> OutBam? https://github.com/broadinstitute/viral-assemble/blob/80bcc1da5c6a0174362ca9fd8bc0b49ee0b4103b/assembly.py#L91
         assembly.py trim_rmdup_subsamp \