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Add data page links to public mito constraint files
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@phildarnowsky-broad
phildarnowsky-broad committed Feb 26, 2025
1 parent cf33d8c commit d71262d
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43 changes: 43 additions & 0 deletions browser/src/DataPage/GnomadV3Downloads.tsx
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Original file line number Diff line number Diff line change
Expand Up @@ -652,6 +652,49 @@ const GnomadV3Downloads = () => (
</ListItem>
</FileList>
</DownloadsSection>

<DownloadsSection>
<SectionTitle id="v3-mito-constraint">Mitochondrial constraint</SectionTitle>
<p>
For more information about mitochondrial constraint, see {/* @ts-expect-error */}
<ExternalLink href="https://doi.org/10.1038/s41586-024-08048-x">
<em>Quantifying constraint in the human mitochondrial genome.</em> Nature 635, 390–397
(2024)
</ExternalLink>
.
</p>
<FileList>
{/* @ts-expect-error TS(2745) FIXME: This JSX tag's 'children' prop expects type 'never... Remove this comment to see the full error message */}
<ListItem>
<DownloadLinks
label="Mitochondrial gene constraint README"
path="/release/3.1/secondary_analyses/mito_constraint/mito_gene_constraint_README.txt"
includeAzure={false}
/>
</ListItem>
{/* @ts-expect-error TS(2745) FIXME: This JSX tag's 'children' prop expects type 'never... Remove this comment to see the full error message */}
<ListItem>
<DownloadLinks
label="Mitochondrial regional constraint README"
path="/release/3.1/secondary_analyses/mito_constraint/mito_regional_constraint_README.txt"
/>
</ListItem>
{/* @ts-expect-error TS(2745) FIXME: This JSX tag's 'children' prop expects type 'never... Remove this comment to see the full error message */}
<ListItem>
<DownloadLinks
label="Mitochondrial gene constraint TSV"
path="/release/3.1/secondary_analyses/mito_constraint/mito_gene_constraint.tsv"
/>
</ListItem>
{/* @ts-expect-error TS(2745) FIXME: This JSX tag's 'children' prop expects type 'never... Remove this comment to see the full error message */}
<ListItem>
<DownloadLinks
label="Mitochondrial regional constraint TSV"
path="/release/3.1/secondary_analyses/mito_constraint/mito_regional_constraint.tsv"
/>
</ListItem>
</FileList>
</DownloadsSection>
</>
)

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211 changes: 211 additions & 0 deletions browser/src/DataPage/__snapshots__/DataPage.spec.tsx.snap
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Original file line number Diff line number Diff line change
Expand Up @@ -15932,6 +15932,217 @@ exports[`Data Page has no unexpected changes 1`] = `
</li>
</ul>
</section>
<section
className="c15"
>
<span
className="c6"
>
<h2
className="c16"
>
<a
aria-hidden="true"
className="c8 c9"
href="#v3-mito-constraint"
id="v3-mito-constraint"
>
<img
alt=""
aria-hidden="true"
height={12}
src="test-file-stub"
width={12}
/>
</a>
Mitochondrial constraint
</h2>
</span>
<p>
For more information about mitochondrial constraint, see
<a
className="c11"
href="https://doi.org/10.1038/s41586-024-08048-x"
rel="noopener noreferrer"
target="_blank"
>
<em>
Quantifying constraint in the human mitochondrial genome.
</em>
Nature 635, 390–397 (2024)
</a>
.
</p>
<ul
className="c19"
>
<li
className="c20"
>
<span>
Mitochondrial gene constraint README
</span>
<br />
<span>
Download from

<a
aria-label="Download Mitochondrial gene constraint README from Google"
className="c11"
href="https://storage.googleapis.com/gcp-public-data--gnomad/release/3.1/secondary_analyses/mito_constraint/mito_gene_constraint_README.txt"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Google
</a>
/
<a
aria-label="Download Mitochondrial gene constraint README from Amazon"
className="c11"
href="https://gnomad-public-us-east-1.s3.amazonaws.com/release/3.1/secondary_analyses/mito_constraint/mito_gene_constraint_README.txt"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Amazon
</a>
</span>
</li>
<li
className="c20"
>
<span>
Mitochondrial regional constraint README
</span>
<br />
<span>
Download from

<a
aria-label="Download Mitochondrial regional constraint README from Google"
className="c11"
href="https://storage.googleapis.com/gcp-public-data--gnomad/release/3.1/secondary_analyses/mito_constraint/mito_regional_constraint_README.txt"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Google
</a>
/
<a
aria-label="Download Mitochondrial regional constraint README from Amazon"
className="c11"
href="https://gnomad-public-us-east-1.s3.amazonaws.com/release/3.1/secondary_analyses/mito_constraint/mito_regional_constraint_README.txt"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Amazon
</a>
/
<a
aria-label="Download Mitochondrial regional constraint README from Microsoft"
className="c11"
href="https://datasetgnomad.blob.core.windows.net/dataset/release/3.1/secondary_analyses/mito_constraint/mito_regional_constraint_README.txt"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Microsoft
</a>
</span>
</li>
<li
className="c20"
>
<span>
Mitochondrial gene constraint TSV
</span>
<br />
<span>
Download from

<a
aria-label="Download Mitochondrial gene constraint TSV from Google"
className="c11"
href="https://storage.googleapis.com/gcp-public-data--gnomad/release/3.1/secondary_analyses/mito_constraint/mito_gene_constraint.tsv"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Google
</a>
/
<a
aria-label="Download Mitochondrial gene constraint TSV from Amazon"
className="c11"
href="https://gnomad-public-us-east-1.s3.amazonaws.com/release/3.1/secondary_analyses/mito_constraint/mito_gene_constraint.tsv"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Amazon
</a>
/
<a
aria-label="Download Mitochondrial gene constraint TSV from Microsoft"
className="c11"
href="https://datasetgnomad.blob.core.windows.net/dataset/release/3.1/secondary_analyses/mito_constraint/mito_gene_constraint.tsv"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Microsoft
</a>
</span>
</li>
<li
className="c20"
>
<span>
Mitochondrial regional constraint TSV
</span>
<br />
<span>
Download from

<a
aria-label="Download Mitochondrial regional constraint TSV from Google"
className="c11"
href="https://storage.googleapis.com/gcp-public-data--gnomad/release/3.1/secondary_analyses/mito_constraint/mito_regional_constraint.tsv"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Google
</a>
/
<a
aria-label="Download Mitochondrial regional constraint TSV from Amazon"
className="c11"
href="https://gnomad-public-us-east-1.s3.amazonaws.com/release/3.1/secondary_analyses/mito_constraint/mito_regional_constraint.tsv"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Amazon
</a>
/
<a
aria-label="Download Mitochondrial regional constraint TSV from Microsoft"
className="c11"
href="https://datasetgnomad.blob.core.windows.net/dataset/release/3.1/secondary_analyses/mito_constraint/mito_regional_constraint.tsv"
onClick={[Function]}
rel="noopener noreferrer"
target="_blank"
>
Microsoft
</a>
</span>
</li>
</ul>
</section>
<span
className="c6"
>
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