Allow for GT to be a nocall if GQ and PL[0] are zero instead of homre…

…f in GenomicsDB (#8759) * Allow for GT to be a nocall if GQ and PL[0] are zero instead of homref in GenomicsDB * Move to 1.5.3 release from snapshot --------- Co-authored-by: Nalini Ganapati <[email protected]> Co-authored-by: Nalini Ganapati <[email protected]>
broadinstitute · May 6, 2024 · 24f93b5 · 24f93b5
1 parent 5c32785
commit 24f93b5
Show file tree

Hide file tree

Showing 3 changed files with 5 additions and 5 deletions.
diff --git a/build.gradle b/build.gradle
@@ -63,7 +63,7 @@ final barclayVersion = System.getProperty('barclay.version','5.0.0')
 final sparkVersion = System.getProperty('spark.version', '3.5.0')
 final hadoopVersion = System.getProperty('hadoop.version', '3.3.6')
 final disqVersion = System.getProperty('disq.version','0.3.8')
-final genomicsdbVersion = System.getProperty('genomicsdb.version','1.5.2')
+final genomicsdbVersion = System.getProperty('genomicsdb.version','1.5.3')
 final bigQueryVersion = System.getProperty('bigQuery.version', '2.35.0')
 final bigQueryStorageVersion = System.getProperty('bigQueryStorage.version', '2.47.0')
 final guavaVersion = System.getProperty('guava.version', '32.1.3-jre')

diff --git a/src/test/resources/large/gvcfs/combined_with_genotypes.g.vcf.gz b/src/test/resources/large/gvcfs/combined_with_genotypes.g.vcf.gz
diff --git a/src/test/resources/large/gvcfs/combined_with_genotypes.g.vcf.gz.tbi b/src/test/resources/large/gvcfs/combined_with_genotypes.g.vcf.gz.tbi