Added a check for whether files can be created and executed within the configured tmp-dir #4565

Job	Run time
Validate script WDLs using womtools	53s
Validate generated WDLs using womtools	13m 34s
build and push gatk docker to artifacts	16m 50s
check if the environment has privileges	1s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	24m 43s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	25m 13s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	24m 42s
WDL test RUN_M2_WDL on cromwell	16m 38s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	12m 49s
Java 17.0.6+10 build and test cloud	24m 34s
Java 17.0.6+10 build and test integration	32m 52s
Java 17.0.6+10 build and test unit	21m 5s
Java 17.0.6+10 test on docker integration	36m 46s
Java 17.0.6+10 test on docker unit	22m 20s
Java 17.0.6+10 test on docker variantcalling	31m 58s
Java 17.0.6+10 test on docker conda	25m 26s
	5h 30m 24s

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